FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002131075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002131075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences926600
Sequences flagged as poor quality0
Sequence length20-100
%GC51

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT48090.5189941722426074No Hit
ATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGG18220.19663285128426505No Hit
TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC10870.1173105978847399No Hit
ATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTA10080.1087848046622059No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)