FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002135094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002135094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2325363
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40390.17369331153888662No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA26550.11417572224207576No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)