Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00002135139 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 869322 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3164 | 0.36396180011549234 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 2618 | 0.30115423283892506 | No Hit |
AGATCGGAAGAGCACACGTCAGAACTCCAGTCACACTCTCCAATCTCGTA | 2464 | 0.2834392779660471 | TruSeq Adapter, Index 8 (97% over 36bp) |
TGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1446 | 0.16633652432585394 | No Hit |
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT | 1104 | 0.126995520647125 | No Hit |