Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00002135149 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 450345 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 2874 | 0.6381773973287147 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1579 | 0.3506200801607656 | No Hit |
AGATCGGAAGAGCACACGTCAGAACTCCAGTCACGAGTAGAGATCTCGTA | 1152 | 0.2558038836891716 | TruSeq Adapter, Index 9 (97% over 35bp) |
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT | 1029 | 0.22849148985777573 | No Hit |
TGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 779 | 0.17297849426550757 | No Hit |
TGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATTGACTT | 569 | 0.1263475779680023 | No Hit |