FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002135159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002135159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2405834
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT33570.13953581169773144No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA26770.11127118496122343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)