FastQCFastQC Report
Fri 31 Mar 2023
EGAF00002192170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002192170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24396913
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT851940.34919991721903504No Hit
CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACT245160.10048812323100059No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)