FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002195090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002195090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2402
Sequences flagged as poor quality0
Sequence length251
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA753.122398001665279No Hit
AGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA753.122398001665279No Hit
TGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA702.9142381348875936No Hit
TTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA692.8726061615320564No Hit
CAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT652.7060782681099087No Hit
TGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT642.6644462947543714No Hit
CGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA642.6644462947543714No Hit
GGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT632.622814321398834No Hit
AGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT612.53955037468776No Hit
TAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA602.497918401332223No Hit
GAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA592.456286427976686No Hit
GGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA572.373022481265612No Hit
TAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT572.373022481265612No Hit
TCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA552.289758534554538No Hit
GTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT532.206494587843464No Hit
AAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA522.164862614487927No Hit
TTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT522.164862614487927No Hit
ATACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA512.12323064113239No Hit
CGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT512.12323064113239No Hit
GTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA481.9983347210657785No Hit
TCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT461.9150707743547042No Hit
ATACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT451.8734388009991676No Hit
AAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT441.8318068276436303No Hit
ACACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT431.7901748542880933No Hit
TAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA411.706910907577019No Hit
GCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA411.706910907577019No Hit
AGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA391.623646960865945No Hit
ACACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA391.623646960865945No Hit
GCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT381.5820149875104081No Hit
CTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT381.5820149875104081No Hit
GAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT371.5403830141548709No Hit
CTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA361.4987510407993339No Hit
CGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA361.4987510407993339No Hit
CCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA351.4571190674437968No Hit
GAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA351.4571190674437968No Hit
AAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA331.3738551207327228No Hit
GGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA321.3322231473771857No Hit
CAACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA321.3322231473771857No Hit
TTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA311.2905911740216487No Hit
TGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA311.2905911740216487No Hit
GTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA291.2073272273105746No Hit
TCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA281.1656952539550374No Hit
ATACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA251.0407993338884263No Hit
GCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA240.9991673605328892No Hit
CTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA220.9159034138218152No Hit
CCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA220.9159034138218152No Hit
CCACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT200.832639467110741No Hit
ACACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA140.5828476269775187No Hit
GTACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGCCAGAAGGCAAGA40.16652789342214822No Hit
CGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGCCAGAAGGCAAGA30.12489592006661115No Hit
TGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACGCCAGAAGGCAAGA30.12489592006661115No Hit
TGACTACGATGTTGCCAGGGTTTTCCCAGTCACGACATCGCTGAAGACAG30.12489592006661115No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)