FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002195091

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002195091
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2402
Sequences flagged as poor quality0
Sequence length251
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA29112.114904246461283No Hit
GTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2068.576186511240632No Hit
TGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1707.077435470441299No Hit
TAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1646.827643630308076No Hit
TCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1506.244796003330558No Hit
GGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1235.1207327227310575No Hit
GAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1084.496253122398001No Hit
AGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA974.038301415487094No Hit
TGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG974.038301415487094No Hit
CAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA883.6636136552872607No Hit
ACGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA873.6219816819317234No Hit
GCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA863.5803497085761866No Hit
CGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA712.955870108243131No Hit
ATGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA592.456286427976686No Hit
AGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG582.4146544546211492No Hit
CCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA552.289758534554538No Hit
CTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG411.706910907577019No Hit
GCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG411.706910907577019No Hit
CTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA381.5820149875104081No Hit
TAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG351.4571190674437968No Hit
CAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG351.4571190674437968No Hit
CGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG321.3322231473771857No Hit
GGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG301.2489592006661114No Hit
GTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG281.1656952539550374No Hit
ATGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG271.1240632805995003No Hit
TTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG261.0824313072439635No Hit
CCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG180.7493755203996669No Hit
TCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG170.7077435470441299No Hit
AAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA160.6661115736885929No Hit
GAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG140.5828476269775187No Hit
AAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG130.5412156536219818No Hit
ACGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG130.5412156536219818No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)