FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002195128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002195128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2712
Sequences flagged as poor quality0
Sequence length251
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT2579.476401179941004No Hit
TGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT2167.964601769911504No Hit
AGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT1907.005899705014749No Hit
GGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT1746.415929203539823No Hit
CATATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT1405.162241887905605No Hit
GTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT1023.761061946902655No Hit
CTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT993.650442477876106No Hit
AATATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT983.6135693215339235No Hit
TCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT843.0973451327433628No Hit
GATATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT833.06047197640118No Hit
ATTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT823.023598820058997No Hit
TTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT772.8392330383480826No Hit
TATATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT772.8392330383480826No Hit
GCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT702.5811209439528024No Hit
ACTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT662.433628318584071No Hit
CCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGAAGATGGAAGGTT642.359882005899705No Hit
CGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT321.1799410029498525No Hit
TGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT270.995575221238938No Hit
TGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG260.9587020648967551No Hit
GGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG250.9218289085545722No Hit
GTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG220.8112094395280236No Hit
CGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG210.7743362831858407No Hit
AGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG200.7374631268436578No Hit
AGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT200.7374631268436578No Hit
TATATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG160.5899705014749262No Hit
CATATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG150.5530973451327433No Hit
GATATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG150.5530973451327433No Hit
CATATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT150.5530973451327433No Hit
GTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT150.5530973451327433No Hit
GATATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT150.5530973451327433No Hit
CCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT140.5162241887905604No Hit
CTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG130.47935103244837757No Hit
GGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT130.47935103244837757No Hit
TCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG130.47935103244837757No Hit
ATTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT130.47935103244837757No Hit
AATATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG130.47935103244837757No Hit
AATATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT120.4424778761061947No Hit
TATATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT120.4424778761061947No Hit
CTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT120.4424778761061947No Hit
ACTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT110.4056047197640118No Hit
ACTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG90.33185840707964603No Hit
TTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT90.33185840707964603No Hit
TCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT90.33185840707964603No Hit
ATTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG80.2949852507374631No Hit
CCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG80.2949852507374631No Hit
TTTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG80.2949852507374631No Hit
GCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCGATTCTCAGGGCG80.2949852507374631No Hit
GCTATGAGACAACTCCAGGGTTTTCCCAGTCACGACGCTCTGAGATGAAT60.22123893805309736No Hit
AGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCTCTGAGCTGAATG50.18436578171091444No Hit
TGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCTCTGAGCTGAATG50.18436578171091444No Hit
CCTATGAGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG40.14749262536873156No Hit
AATATGAGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGAAG40.14749262536873156No Hit
TGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCAGACCCCAGGACC40.14749262536873156No Hit
CATATGAGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG40.14749262536873156No Hit
TCTATGAGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGAAG30.11061946902654868No Hit
TTTATGAGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGAAG30.11061946902654868No Hit
TGTATGAGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG30.11061946902654868No Hit
AGTATGAGATGTTGCCAGGGTTTTCCCAGTCACGACTCTCCACTCTGACG30.11061946902654868No Hit
TATATGAGACAACTCCAGGGTTTTCCCAGTCACGACCCAGTTCCCTAACT30.11061946902654868No Hit
CATATGAGACAACTCCAGGGTTTTCCCAGTCACGACCTCTGAGCTGAATG30.11061946902654868No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)