FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002195129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002195129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2712
Sequences flagged as poor quality0
Sequence length251
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA32612.020648967551622No Hit
GTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2167.964601769911504No Hit
TAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1957.1902654867256635No Hit
TGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1766.489675516224189No Hit
TCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1535.641592920353982No Hit
AGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1254.609144542772861No Hit
GGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1194.387905604719764No Hit
GCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1134.166666666666666No Hit
GAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1053.8716814159292032No Hit
CAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA873.2079646017699117No Hit
ACGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA873.2079646017699117No Hit
TGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG863.171091445427729No Hit
ATGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA833.06047197640118No Hit
CGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA772.8392330383480826No Hit
CCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA682.5073746312684366No Hit
CTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA622.286135693215339No Hit
AGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG552.028023598820059No Hit
CTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG531.9542772861356934No Hit
CGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG461.696165191740413No Hit
GGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG451.6592920353982303No Hit
ATGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG391.4380530973451326No Hit
TAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG361.3274336283185841No Hit
TTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG361.3274336283185841No Hit
GCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG351.2905604719764012No Hit
GTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG301.1061946902654867No Hit
TCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG240.8849557522123894No Hit
CCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG220.8112094395280236No Hit
AAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG210.7743362831858407No Hit
AAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA170.6268436578171092No Hit
GAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG140.5162241887905604No Hit
CAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG140.5162241887905604No Hit
ACGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG130.47935103244837757No Hit
GGCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG70.2581120943952802No Hit
TGCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG60.22123893805309736No Hit
GCCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG60.22123893805309736No Hit
AGCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG60.22123893805309736No Hit
GTCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG60.22123893805309736No Hit
GACCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG50.18436578171091444No Hit
ATCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG50.18436578171091444No Hit
TTCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG40.14749262536873156No Hit
AACCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG40.14749262536873156No Hit
ACCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG30.11061946902654868No Hit
CTCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG30.11061946902654868No Hit
TAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGCACACGGCAGGGTCA30.11061946902654868No Hit
TCCCTGTGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG30.11061946902654868No Hit
CGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGACAGGGTCA30.11061946902654868No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)