FastQCFastQC Report
Wed 22 Mar 2023
EGAF00002207476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002207476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84301034
Sequences flagged as poor quality0
Sequence length35-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG1367910.16226491361897175No Hit
CTAGATTTTATGTATACGGGTTCTTCGAATGTGTGGTAGGGTGGGGGGCA883020.10474604617542414No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)