FastQCFastQC Report
Tue 23 May 2023
EGAF00002207549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002207549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59993736
Sequences flagged as poor quality0
Sequence length35-101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN6282091.0471243197789848No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA833590.13894617264709103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)