FastQCFastQC Report
Mon 3 Apr 2023
EGAF00002207733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002207733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71130064
Sequences flagged as poor quality0
Sequence length35-101
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7173631.0085229221781666No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA1301230.18293671154295602No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA775340.10900313543932703No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)