FastQCFastQC Report
Fri 30 Dec 2022
EGAF00002212647

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002212647
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences205626285
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAG2704300.13151528755188083No Hit
CGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCT2670440.12986861091226737No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)