FastQCFastQC Report
Fri 30 Dec 2022
EGAF00002212669

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002212669
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences221692199
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCG4563990.20587057282967364No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC2364670.10666455611277507No Hit
CTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCT2229860.10058360240271694No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)