FastQCFastQC Report
Fri 30 Dec 2022
EGAF00002212683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002212683
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences231403545
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCG5917660.25572901227593553No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC3350760.14480158460839485No Hit
CTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCT2889400.12486411995114423No Hit
GTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTG2596440.11220398546616907No Hit
CGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGT2503480.10818676092451392No Hit
CTACAATCAACCAACAAGTCATTATTACCCTCACTGTCAACCCAACACAG2464320.10649447915761186No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)