FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002213301

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002213301
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences770668
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT63630.8256473604716947No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT25060.3251724477985332No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT17040.22110688389812475No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10720.13910010536313952No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10210.13248246975351255No Hit
ATACATATCTTATCTCAATAGTGTTCATTTCTTCCGTCCTAAATGCTTGA8260.10717974536376236No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)