FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002215119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002215119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences832425
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACAGGAATATTGACCTGTTTCCCATCAGCTACGCATCTCTGCCTCGCC31140.3740877556536625No Hit
ATCCTACACAGATCTGTTCAAAGTCCAATGTAAAGCTACAGTAAAGGTTC30380.36495780400636696No Hit
TTCCTGTACCGATCAATAGTGCGATGTGGGGACGGAGAAGGTTAGCTCAG25900.3111391416644142No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT22990.27618103733069044No Hit
ACCATACACTGTCCCCATCCCGGATAACGGGACAAGGTTAGAACCTCAAA21140.25395681292608946No Hit
AGCCTAAACAGTGCTCTACCCCCGATGGTAATACTTGAGGCACTACCTAA18870.22668708892693035No Hit
GTTTAGGCTAGGGGGTCATGGCGACTTACCAAACCTATGCAAACTCCGAA16630.19977775775595397No Hit
TCATTACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT13740.16505991530768538No Hit
CCTTAGAATACTCATCTCGCGCACCAGTGTCGGTTTGCGGTACGGTCGTC13070.157011142144938No Hit
GAGTAATGATGGCCACACTGTCTCCTCCAGAGACTCAGCGAAGTTGAAAT13010.15629035648857253No Hit
ATTCTAAGGCGCTTGAGAGAACTCTGGAGAAGGAACTCGGCAAATTGACA12600.15136498783674204No Hit
GCGTTAAAGGGGGTGAAAAGCCCCCTCGCCGAAAGCGCAAGGTTTCCTAC11430.137309667537616No Hit
ACTAAAGGCACACCTTCTTCCGAAGTTACGGTGTCAATTTGCCGAGTTCC11020.13238429888578548No Hit
CCATACACTGTCCCCATCCCGGATAACGGGACAAGGTTAGAACCTCAAAC10410.12505631137940354No Hit
GTGCTGGAAGATTAAATGATGGGGTGCAAGCTCTTGACTGAAGTCCCAGT10110.12145238309757636No Hit
CGCTTATGCCAATGCACTATCGTCACGATTTCCGACCGTAACTAGCGTAC9800.11772832387302161No Hit
CTATTGATCGGTACAGGAATATTGACCTGTTTCCCATCAGCTACGCATCT9400.11292308616391868No Hit
GTGTAGGATAGGTGGGAGGCTTTGAAGTAGGGACGCTAGTTTCTATGGAG9220.11076072919482237No Hit
CTGTAAGCCTGTGAAGGTGGGTTGTGAAGCCTGCTGGAGGTATCAGAAGT9210.11064059825209478No Hit
CTTTAACGCTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAGGC9180.11028020542391208No Hit
CCCTATACGTCGACTTTCGTCTTTGCAGAGTGCTGTGTTTTTAATAAACA8930.10727693185572273No Hit
ACTCTATTCGCGCCTAGTTCCACAATCTGCATTTCTCATACGGGGCTATC8870.1065561461993573No Hit
CTTTAAATGATGGCTGCTTCTAAGCCAACATCCTGACTGTTTTAGCCTTC8690.10439378923026098No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)