FastQCFastQC Report
Thu 23 Feb 2023
EGAF00002217937

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002217937
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119804239
Sequences flagged as poor quality0
Sequence length100
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1310000.10934504579591711No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)