FastQCFastQC Report
Fri 10 Feb 2023
EGAF00002218047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002218047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109718657
Sequences flagged as poor quality0
Sequence length100
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12885511.1744137553561196No Hit
GGGGGTTGTTGCTTTGAGGGAAGTTACGCTTATTTTTTTTTTGTCTTTTG1768080.1611467045208182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)