FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002253593

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002253593
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2860
Sequences flagged as poor quality0
Sequence length65-588
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGGT96233.63636363636363No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACGGTGACCAGGGTT42414.825174825174825No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCGTGGT2849.93006993006993No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAAGAGACGGTGACCATTGT2328.111888111888112No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACGGTGACCGTGGTC2117.377622377622378No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAAGAGACGGTGACCATTGTC692.4125874125874125No Hit
GGGAAAAAGGGTTGGGGCGGATGCACTCCCTGAAGAGACGGTGACCATTG652.272727272727273No Hit
GAATTCTCACAGGAGACGAGGGGGAAAAGGGTTGGGGCGGATGCACTCCC531.8531468531468531No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACAGTGACCAGGGT230.8041958041958042No Hit
TGTCTGCACCCTGATATGATGGGGAACACATCCGGAGCCTTGGTGGGTGC200.6993006993006993No Hit
GGGAAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGG200.6993006993006993No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCATGTCGGGCGCCTGGTCACTG160.5594405594405595No Hit
CGGGAAGACCTTGGGGCTGGTCGGGGATGCTGAGGAGACGGTGACCGTGG130.45454545454545453No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCATGTCGGGCGCCTGGTCACTGC90.3146853146853147No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACAGTGACCAGGGTG90.3146853146853147No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGGGGAGACGGTGACCGTGGT70.24475524475524477No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAAGAGACGGTGACTCTTGT70.24475524475524477No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGACCCGCAGGACAAAAG70.24475524475524477No Hit
GGGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGG60.2097902097902098No Hit
CCAGGGGGAAGACCGATGGGCCCTTGGTGGAAGCGAGGTGGGGGTCTCAG50.17482517482517482No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCGTGAT50.17482517482517482No Hit
GGAACACCTCCGGAGCCTTGGTGGGTGCTGAGGAGACGGTGACCAGGGTT50.17482517482517482No Hit
GGGGAAAAGGGTTGGGGCGGATGCACTCCCTGAAGAGACGGTGACCATTG40.13986013986013987No Hit
GGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAGGGTTCCCTGGCCCCAG40.13986013986013987No Hit
GGGAAAGGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGGT40.13986013986013987No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCATGGT40.13986013986013987No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACGGTGACCAGGGTG40.13986013986013987No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTTTCCGACTT30.1048951048951049No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTTTTAGGGGTCTGGGAAGGGC30.1048951048951049No Hit
GGGAAAAGGGTTGGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGG30.1048951048951049No Hit
GTACGTGATCCAAGCTAGATCTACGGGAGTCCCACCTACTTGGGAGGCTG30.1048951048951049No Hit
GGGAAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCGTGG30.1048951048951049No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGTTACCATT30.1048951048951049No Hit
AAAGGTAAGGTAAAAGGGATCTACGGGAGGACGCGGAGGCCGGGGACGCG30.1048951048951049No Hit
GGGAAAAAGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCGTGGT30.1048951048951049No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACGGTGACCATGGTT30.1048951048951049No Hit
GGCCCTTGGTGGAAGCTGTGGCTGCTCTGCCCTGGTCCCCTGAGCTCCAG30.1048951048951049No Hit
GGGGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGG30.1048951048951049No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)