FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002253606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002253606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10987
Sequences flagged as poor quality0
Sequence length72-588
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGGT434739.564940384090285No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACGGTGACCAGGGTT147213.39765177027396No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCGTGGT10339.402020569764268No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAAGAGACGGTGACCATTGT8447.681805770455993No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACGGTGACCGTGGTC6716.107217620824611No Hit
GAATTCTCACAGGAGACGAGGGGGAAAAGGGTTGGGGCGGATGCACTCCC3182.894329662328206No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAAGAGACGGTGACCATTGTC2472.2481114043870027No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACAGTGACCAGGGT2442.220806407572586No Hit
TGTCTGCACCCTGATATGATGGGGAACACATCCGGAGCCTTGGTGGGTGC1881.7111131337034675No Hit
GGGAAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGG1661.5108764903977427No Hit
CCAGGGGGAAGACCGATGGGCCCTTGGTGGAAGCGAGGTGGGGGTCTCAG910.8282515700373169No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACAGTGACCAGGGTG540.4914899426595067No Hit
GGAACACATCCGGAGCCTTGGTGGGTGCTGAGGAGACGGTGACCAGGGTG410.3731682897970328No Hit
GGGAAAAAGGGTTGGGGCGGATGCACTCCCTGAAGAGACGGTGACCATTG400.3640666241922272No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCATGTCGGGCGCCTGGTCACTG340.30945663056339306No Hit
GGGAAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCGTGG330.30035496495858743No Hit
GGGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGG230.20933830891053062No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTGAGGACCCGCAGGACAAAAG210.19113497770091928No Hit
CCAGGGGGAAGACCGATGGGCCCTTGGTGGAGGCGAGGTGGGGGTCTCAG110.10011832165286248No Hit
GGGAAAAGGGTTGGGGCGGATGCACTCCCTTTTAGGGGTCTGGGAAGGGC110.10011832165286248No Hit
GGGAAAAGGGGTTGGGGCGGATGCACTCCCTGAGGAGACGGTGACCAGGG110.10011832165286248No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)