FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002293819

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002293819
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Sequences flagged as poor quality0
Sequence length75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCACCAGCAGAATACGGTGTTGCCCCCATGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGAGCCCAC10.9900990099009901No Hit
ACCAAAAAAAAATTCTGATCAGAACCAAACAAATATCATACGTACACATCACAAACAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
TGGTAACACAGTGGAGAGAATTGTGGTCCATTGTAACAACAACCAGGACTTCCAGGAATGGTTGGAGCAGCTGAA10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCCTTTCACATAAAACCCAAAAAAAAAAAAA10.9900990099009901No Hit
CATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGGGGGGG10.9900990099009901Illumina PCR Primer Index 7 (96% over 27bp)
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGTTTGGGGGGACCCCCCCCGGTGGATTTTA10.9900990099009901No Hit
CCTCAGGACTGTGCCTTGGTGCGTCCACCGCCCCCTTTTGAACTCAAAAAAGTCATCCTCAGACCTGTCTCTTAT10.9900990099009901No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTACCAGGAAAGACCCAAAAAAAAAAGGAGATAAAAGTATATTT10.9900990099009901No Hit
GTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.9900990099009901No Hit
GCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGACTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.9900990099009901No Hit
CCAGAACACAGAATGTTCTTGGTGAGAAGGGCCGGCGGATTCGGGAACTGACTGCTGTAGTTCAGAAGAGGTTTG10.9900990099009901No Hit
GCAGAAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9900990099009901TruSeq Adapter, Index 25 (96% over 27bp)
GTTGTCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTTACTGCAACCTCCACCTTCTGGGTTCAAGTGATTCTCC10.9900990099009901No Hit
GTTCAAAGTCACTCTCGGCCCGCAGCTGCTGGGCCACAGCCATGGTGGGCGATGGTCCCAGGGCTGTCTCTTATA10.9900990099009901No Hit
CCTCAAGGGCATCCTGGGCTACACTGAGCACCAGGTGGTCTCCTCTGACTTCAACAGCGACACCCACTCCTCCAC10.9900990099009901No Hit
GTTTTGTGGAGTATCCTTCCCATGGATCTAATGTAGCTGCTGAACCAGGGTAGAGCTGAGAGTGGTAGCTCACAA10.9900990099009901No Hit
GTCCCCGTCCCTGGACGTGCAGATGACTTCTCGCAGGTTAATGTTCATCCAGTTGTCGCAGCTCACCAGGTGTCC10.9900990099009901No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAAAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
AACAACGCAGATTACATCGGCGGCACTGCAGCACTAGATAAATCTACAAAACAAGCACTCTCACTCCTTACACTT10.9900990099009901No Hit
CACAGAGATAGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGC10.9900990099009901No Hit
GGTCGTGTGGATCCCTGAGGCCGCAGCTCGCGGTGAATCTCATCCAAGTCCGGCCGCCGCCGCTTCGCCTTCATC10.9900990099009901No Hit
ATAAAAACACAGAAAAAATGAGGTTACAAAAAAAACACAAAAAAAGAAGACAAAAAAAAACAACAAAAAAAAAAA10.9900990099009901No Hit
GGTATCAACGCAGAGTACATGGGGAGGAGGCCCAAAGACACACGCTCGGTTACCACCAGACCCAAAAAAAAAAAA10.9900990099009901No Hit
GATCCAGGCGATGTGGTCCCAGGTCAGGGTCGGATCGAAGTTGCGGTGGATCCAGGCGGAGAAGTCGCCGACCTG10.9900990099009901No Hit
CTATTTATTCAGTGCTTCACGTCTCTGTCCGGGGTGCCTCTGTCTCTCAACTCTCCCCATGTACTCTGCGTTGAT10.9900990099009901No Hit
CCAGTTATCAATGCTGACAAGAGCCTAACAAGTGCCAACTTACAGATGATTACGCATTTTGAATTCTAATGAACT10.9900990099009901No Hit
GTTGACCTGAGTGACAACAGCATCCACGACCTCCCCTTTAAATGGCCGGAAGACAATGGCCTTGTACTTAACTGG10.9900990099009901No Hit
TATCAACGCAGAGTACATGGGGGGGCGGTCTCCTCCCAAAGCGTAACGGAGGAGTTCGAAGGTACGCTAGTTACG10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGCTGTCTCTTATACACATCTCCGAGC10.9900990099009901No Hit
GTACATGGGACCATACAAGAACCACACTAACACACCTAAAAAAAAAAAAAAAAAAAAAAAAAACGAAACAAAAAG10.9900990099009901No Hit
CCCTATAGTGAGTCGTATTACTGCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACG10.9900990099009901No Hit
ATCTGTTCCTTTTCCGTAAGGATCATCTCAATGTGGCAGGGAGAGCTCATGTATGGGTTAATCCGACCATGAGCT10.9900990099009901No Hit
GGTTCCTTTGGTCGCTCGCTCCTCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCG10.9900990099009901No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAGACAGGGTATAAAAATAAAAAAAAAAACAAAACCAACCAC10.9900990099009901No Hit
ATAGTGAGTCGTATTACTGCCCATGTACTCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGACGTCA10.9900990099009901No Hit
TCTTTCTCCCGCCCGAACGGTCGCCGCGGCCAACTGCCTCGCCCGCCTGGCAGCCTAACCCTCCTTCTCTTCTTC10.9900990099009901No Hit
GCTGCGACAAGACCCACACCCCCATGTACTCTGCGTTGATATCTGTCTCTTATACACATCTCCGAGCCCACGAGA10.9900990099009901No Hit
CCTTGGACGAGTGAGAAAGTAGGCATTCAAATCATTTTCTGCAGATCTGTATTTTCTTGTGGAGCTGGGTATGAG10.9900990099009901No Hit
CACAGAGATAGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATCTGTCTCTTATACACATCTCCGAGCCC10.9900990099009901No Hit
CAGCTGGACTATGAGTCTGAGCCCCTCAACATTACTGTAATAAAAGCTCCGCGTGAGAAGTACTGGCTACAATTT10.9900990099009901No Hit
AGCGCGATCAGCGAACTCGCCAGCGTGCCGTAGATCATCACCAGACCGCCGAACTTCTCTTGGACGGTGTCCCAT10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCGTAGCGACTGTCC10.9900990099009901No Hit
GTTCTTGTTTTAAGCTATTGATAATGCTGCTTTTCCCCACATTTGGGAAACCAATTACTCCAACCCGAATGGCTT10.9900990099009901No Hit
GACTGGCTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAAGCTGTCTCTTATACACATCTC10.9900990099009901No Hit
GTATGAGTCCTTGTAGCTACAGCTGAGGCTGTCTCTGCATTTTGTTTGGCTTGTTTTTTCTTTTTCAGTCGAGCA10.9900990099009901No Hit
CCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTCCGTTGATACTGTCTCTTATACACATCTCAGAGCCCACGAGA10.9900990099009901No Hit
GGGGAAGAGGATGAGTTTGGAGCGGTACTCCTTCAGCCGCTGCACGTTGGTCTGCAGGGACTCCGTGGACTTGTT10.9900990099009901No Hit
GAACCAGGTGCGGGACCTGGTTAGCACTGCATCACCAGTGTCACGGGAAAGAGGTACTTTCCTAGCTCCCCAGAG10.9900990099009901No Hit
CACGATCTCATTGGTCACCACCACAAGGACCAGCGACAGGCAGCCCAGGAGCCATGTCAGCAGGGGCACGTCCTC10.9900990099009901No Hit
GGCGCGGTGGCTCACGCCTGTAATCCCACCACTTTGGGAGGCCGAGGCGGGCGGATCGCGAGGTCAGGAGTTCGA10.9900990099009901No Hit
GAGATAGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC10.9900990099009901No Hit
GCCATCTTTGCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTCCTCCGCCGCCG10.9900990099009901No Hit
GGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGAC10.9900990099009901No Hit
GGTATCAACGCAGAGTACATGGGAGGTTAGAAGAAAAAGACAAAAAATGTCTAAAATGTCGAGAAAAAAAATGTA10.9900990099009901No Hit
AAAACAAGAATACAATCTGATTACACCGAAACACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGAA10.9900990099009901No Hit
ACCATCGGTAGTCTTGACATCAACGTGAGCTTCAATCATTGTCTGCCATTTTTTGACCATGGAACACATTTTGTC10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCCCTCTGCTTCCAG10.9900990099009901No Hit
GGTATCAACGCAGAGTACATGGGGGGGGGACACTTTCGGACCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.9900990099009901No Hit
GGTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACCTGTCTCTTATACACATCTCCGAGC10.9900990099009901No Hit
CTGCAGTGGGCAGTGTTCACAGCCTGGCTGACAGAGCAAGACTCTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
ACGCAGAGTACATGGGGGTGTGGGTCTTGTCGCAGCTCTTGGGCTCGCTTCCGCTCTGGAAGTACAGGTTCTCAT10.9900990099009901No Hit
GAATAAGTGCGATGTGGTGCTGAGAAGAATGCATATTCTGTTGCTTGGGGGTGGCGAATTCTGTAGATGTCTATT10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGCAGCAGTGCAGCAGAACAAGTATCTGAAAGTCTCTTAAACCCATCTCAGAGAC10.9900990099009901No Hit
ATATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCCCCGGTGGGGGGGGTATTTATATTAAA10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGCAGCTGAGCGGCGGTCGGTGTCCTGGAGCGAGGCCCCCGCTCCTCTCACACGT10.9900990099009901No Hit
GTGGAGTCCCTGAGGCCTTGTTTAGGGGAGTCAGAGAGCTGCGGAAGCCAGTCAGGAAGCTTGGGACTGCAACTC10.9900990099009901No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTATTTTTAAGAAAACCCCCCCAATAAAAAAAAAAAAAA10.9900990099009901No Hit
TCCCTATAGTGAGTCGTATTACTGCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC10.9900990099009901Clontech Universal Primer Mix Short (95% over 21bp)
TAAAAAACAAAAATAAAATGGCGACAATGCAGAAATACATATAATAACTAAAAAACAATTATCACAAAATCCAAG10.9900990099009901No Hit
GAATTTCCACTTTGGAGAATACTCAGTTCCAACTTGTGATTCCTGATAGAACAGACTTTACTTTTCTAGCCCAGC10.9900990099009901No Hit
CCCGCGAAGGGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTACCCATGTACT10.9900990099009901No Hit
CGCCAGAGCTGCCCGATGTGATGAAGCCCCAGGACTCGGGAAGCAGTGCCAATGAACAAGCCGTGCAGTGAGACC10.9900990099009901No Hit
AGTCAAGGAGGTGAGGGTTAGTGCCACCCTGCCAGATCTGGAGGACTACTCCCCGTGTGCACTACCCCCAGAGTC10.9900990099009901No Hit
ACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTTCTGTCTCTTATACACATCTCCGAGCCCACG10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGGGGGGGGACACTTTCGGACATCTGGTCGACCTCCAGCATCTGTCTCTTATACA10.9900990099009901No Hit
GAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCTCTCTGCCTGTCTCTTATACACAT10.9900990099009901No Hit
ACAGAGAGACTGCTTGTATAGAACATAAATCTACTGCTGCACTGCCGCCCAAGTACTCAGCGTTGATACATGTCT10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACGATCTCTGTGTGAATTGTGGTGAGATTTTGTGTCT10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGCAGTAATACGACTCACTATAGGGAGCTGTCTCTTATACACATCTCCGAGCCCA10.9900990099009901Clontech Universal Primer Mix Short (95% over 21bp)
GTATCAACGCAGAGTACATGGGGGGGGGGCCGAAATACCGAGGCTCGGTTCCGCGCCGCCCGTGTCTGTTATCCC10.9900990099009901No Hit
GACATCATACTGGTCTCCCTTCTGATAGTCATGTGTAGGAATCTGTTTCAGTTGCTCTTTGGTAAGTCGATTCCG10.9900990099009901No Hit
GGTATCAACGCAGAGTACATGGGAGGAGGACGAAAGACAGAAGAAACGACTCTCCAAGCAAACTATCATCTAACA10.9900990099009901No Hit
CAGAGACACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCGATGTACTCTGCGTTGATACGTGTCTC10.9900990099009901No Hit
GAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCTCTCTGCTTCCAGGGGAGCCCCCA10.9900990099009901No Hit
GTTATTGTGGTGGTAGCGGCGTCTGGCTGCTGCGGACCCCGCCGAGTCCTAGCGCCTGGCCTGCGCGCCGCTGCC10.9900990099009901No Hit
CTGAAACACTAGGGACAGTGGGGGTTGTTGTCCCTGAAAACCCTGAGGACTGTCTCTTATACACATCTCCGAGCC10.9900990099009901No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGCCCCCGGGAAAAAGAAAGAAGGGTTTT10.9900990099009901No Hit
AAAAAAACTAATATTAAATTTTTTTTTTAAAATTTAATAAAACAAAAAAACCACCAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
GGCCTGGACGGCATCGGCGTCGTGGCCCGGCAGCAGCATCAGAAGTCGGTGGGCAGGCCGCCCATGTACTCTGCG10.9900990099009901No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTATTTTTTGTTTTTATAGGTTCAGAGCGTGTGTCTTATACAGATCT10.9900990099009901No Hit
GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCACGTGTCCCGCCCTACTCTATTCGCGCCTAGTTCCA10.9900990099009901No Hit
CAGAGGCTCGGTTCCGAGCAGACCCGTAGCGACTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCCT10.9900990099009901No Hit
CGTACGTACGTACGTACGTACGTACCCGTCTCTTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTA10.9900990099009901No Hit
AAACAACCAATATAACATCTTCCACGGCACCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAA10.9900990099009901No Hit
GTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGAGACT10.9900990099009901No Hit
CGATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGCTCCACCACACCCAGCTAATTTTTGTGTT10.9900990099009901No Hit
GGGCAGAAGTTCCAGAGCCTCAGTGCCACTTTTCCCGGCCCGCTGTACGTCGGGGCACGCCGACCGCGAGCAGCC10.9900990099009901No Hit
CCCCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGA10.9900990099009901No Hit
ACATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCA10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGGGGGGACACTTTCGGACATCTGGTCGACCTCCAGCATCTGTCTCTTATACACA10.9900990099009901No Hit
CTGTCGCTCAGGTGGCGCGATCTCTGCTCACTGCAAGCTCCGCCTACAGGGTTAACTCCTGTCTCTTATACACAT10.9900990099009901No Hit

[FAIL]Adapter Content

Adapter graph