FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002293820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002293820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCCTGTCTCTTATACACATCTG10.9900990099009901No Hit
GCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCCTGTCTCTTATACACAT10.9900990099009901No Hit
GGTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACCTGTCTCTTATACACATCTGACGCTGCCGACGAA10.9900990099009901No Hit
GGGAGATAGTCTGGGACGTGTAAGATACAATGTAGGTTTGTATTTTAATAATATGACGCTGCCGACGAGATGCAG10.9900990099009901No Hit
GAGTAATATATGATTAGTTTTTTTATTTTTTTTTTTTTGGGGGTGAGGGCGGGACCGCGCGGGACGAGTAGAAAA10.9900990099009901No Hit
CTCCCTATAGTGAGTCGTATTACTGCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCTGCC10.9900990099009901Clontech Universal Primer Mix Short (95% over 21bp)
ATATCAACGCAGAGTACATGGGGGTGTGGGTCTTGTCGCAGCCTGTCTCTTATACACATCTGACGCTGCCGACGA10.9900990099009901No Hit
GACAGTCGCTACGGGTCTGCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACC10.9900990099009901No Hit
TCCTCAGGGTTTTCAGGGACAACAACCCCCACTGTCCCTAGTGTTTCAGCTGTCTCTTATACACATCTGACGCTG10.9900990099009901No Hit
CTCCTGACCTCTTGATTTGTCCACCTCAGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCTACCGCGCGTGGCT10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGAC10.9900990099009901No Hit
CGCTTATGCCAATGCACTATCGTCACGATTTCCGACCGTAACTAGCGTACCTTCGAACTCCTCCGTTACGCTTTG10.9900990099009901No Hit
GTCTGAACCGAGCGTATTTGTTTGTGAGTAATAGAGATGTTATATGGGTTGCGGGCTCTTATACACATCTGACGG10.9900990099009901No Hit
ACACAAAATCTCACCACAATTCACACAGAGATCGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCT10.9900990099009901No Hit
GGATCAACGCAGAGGACGTAATTTGGAGATTTAGTATTATTTTATAGTGGCTCAAAAACACATCTGACGCTGCCG10.9900990099009901No Hit
GCTCCATTCAGAAGTGAAGTCTGCTTTGGGAAAGAGGGCCTTTGGAAACTTCTTGGAGGTTTTCAGGAAACTTGC10.9900990099009901No Hit
GTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTGACGCT10.9900990099009901No Hit
GCAGAGGACGGTTTTTTGGGGAGGTGTAGGGTTTGGGGGCGGCACGCCGACCACACCAGCCATGGGATGTCTCAA10.9900990099009901No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9900990099009901No Hit
GCTCTGCTACGACCCGAGCGGCTGACTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACA10.9900990099009901No Hit
GGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGTCCGGCCAAACCAGGAAGGAGTGGTGGTGGTTTGTATGGAGGG10.9900990099009901No Hit
AATCAAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAACACAAAAATTAGCTGGGTGTGGTGGA10.9900990099009901No Hit
GGTCGGACGTTAGGACGGGGGGTGGCGGGGGGGTTTTGACAACTGGCGGGGGCGGCGGCGAGGGGGGGGGTGGTG10.9900990099009901No Hit
GGGGTCTCACTGCACGGCTTGTTCATTGGCACTGCTTCCCGAGTCCTGGGGCTTCATCACATCGGGCAGCTCTGG10.9900990099009901No Hit
GTATCAACGCAGAGTACATAGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTGTCTCTGCTGTCTC10.9900990099009901No Hit
GCGGTACAGACTCTGGGGGTAGTGCACACGGGGAGTAGTCCTCCAGATCTGGCAGGGTGGCACTAACCCTCACCT10.9900990099009901No Hit
CATTGTGACTGTGAATGAGAACCTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCC10.9900990099009901No Hit
ACTGTGGGACATCGCCACCAAGCCGCACTGGCTGTGGCATGTGGCGCTGCATGGCCGACCGCATCATTTCGGCAA10.9900990099009901No Hit
CTATCAACGCAGAGTACATGGGATGCAGTGCAGCAGAAGATATATATACTATACAAGCAGTCTCACTGTCTGTCT10.9900990099009901No Hit
GAAAGTAGGAGGGAGATGAAGGAAAACGTAGGGACGAGTGCAGGGACGCTTGTGAGCTACCACTCTCAGCTCTAC10.9900990099009901No Hit
ATGTGGAACTAGGCGCGAATAGAGTAGGGCGGGACACGTGAAATCCTGTCTGAATATGGGGGGACCATCCTCCAA10.9900990099009901No Hit
GTACGTGTGTGTTTGTTGGTGGTGGGGTTTTGGTGTGGGGTGATACCAGACGCTTATAGAAATCGGAAGCAGCCG10.9900990099009901No Hit
ATATCCAAGTGAACAAAGCACCTAAGATGCGCCGCCGGACCTACAGAGCTCATGGTCGGATTAACCCATACATGA10.9900990099009901No Hit
ATGCTGGAGGTCGACAAGATTTCCGAAAGTGTACCACCCCATGTACTCAGAGTTGATACCAGTCTCTTATACACA10.9900990099009901No Hit
GGTATCAAAGAAGAGTACTTTAATTTTTTTTATTTTTTTTTTTTTTTATATTAAAAAAAAAAAAAAAAAAAAAAC10.9900990099009901No Hit
ATGCTGGAGGTCGACCAGATGTCCGAAAGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9900990099009901No Hit
CATCGGCATTTCTGTGGATCCGAGGAGGCGGAACAAGTCCACGGAGTCCCTGCAGACCAACGTGCAGCGGCTGAA10.9900990099009901No Hit
ATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGCTGTCTCTTATACACATCTACGCTGCC10.9900990099009901No Hit
AGCTTCTGCAGCAGCGCTGCCCCCCCGCTACAGGCCCTGGAGTCCACAAGGTGAAACCGATCTTACGATGCAGAG10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGCAGTAATACGACTCACTATAGGGACTGTCTCTTATACACATCTGACGCTGCCG10.9900990099009901Clontech Universal Primer Mix Short (95% over 21bp)
GGTCAGGCTGGTCTCGAACTCCTGACCTCGCGATCCGCCCGCCTCGGCCTCCCAAAGTGGTGGGATTACAGGCGT10.9900990099009901No Hit
TAACATTGAAGTGAACGAAATATAGCAAATAAAAAGATAACAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
AACCCAGACGACTTTATTTATTAATAATAAAAATTTAATATGCGTTGAACCCTGTCTCATATACACATCTGAATA10.9900990099009901No Hit
CCTGGAAGCAGAGGGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGATA10.9900990099009901No Hit
GAACATAACCGAGCCACACTATATCACAAAAATACAAAATAAATCATCGTTGAAAAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
GCTCGGATCAGAGCAGAACCTTATATAGTGGCTTTATGAAAACAACCAGTTACTCACCTGTGCTAACCTGTGTAT10.9900990099009901No Hit
ATCAACAAAAAGTAAATAAAAAAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
CCCTGGGACCATCGCCCACCATGGCTGTGGCCCAGCAGCTGCGGGCCGAGAGTGACTTTGAACCTGTCTCTTATA10.9900990099009901No Hit
CATCCCCCCCGCGAAGGGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGA10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCCTGTCTCTTATACACATCTGACGCTGCCGACGACTAGTC10.9900990099009901No Hit
ATATAAAGCTGCCGGAGTCCGCGGCGGCGGAGGAGGCGCGCGGCGGAGGCGGCTGCGGCGAGCAAGGAGGCGGAT10.9900990099009901No Hit
CAGCAGCTGAGTTGAGATAAATAATCCTGTGTCCACAGCAAACAGAATCACAACCAACAATGGGATAAAAAATTG10.9900990099009901No Hit
TTGGGGGCTCCCCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACT10.9900990099009901No Hit
TATCAACGCAGAGTACATGGGGAGAGTTGAGAGACAGAGGCACCCCGGACAGAGACGTGAAGCACTGAATAAATA10.9900990099009901No Hit
GGCTCGATTCCAAACAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
TATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCAGACTCTTATACACATCTGACGCAGCCGACGA10.9900990099009901No Hit
GATTTATGTACTATACAAGAAATATATATACTTCCAAAAAAACAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
GTTGAGGGCAATGCCAGCCCCAGCGTCAAAGGTGGAGGAGTGGGTGTCGCTGTTGAAGTCAGAGGAGACCACCTG10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGCTGTCTCTTATACACATCTGACGCT10.9900990099009901No Hit
TATCAACGCAGAGTACATGGGGGCAACACCGTATTCTGCTGGTGAGCTGTCTCTTATACACATCTGACGCTGCCG10.9900990099009901No Hit
GGTATCAACGCAGAGTACATGGGTATCCAGGCCCTGAACTTAGCTCTGCAACAAGCAGACATAATAGACATCTAC10.9900990099009901No Hit
TCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCCTGTCTCTTATACACATCTGACGCTGCCGACGAC10.9900990099009901No Hit
GCCTGGAGGACGTGCCCCTGCTGACATGGCTCCTGGGCTGCCTGTCGCTGGTCCTTGTGGTGGTGACCAATGAGA10.9900990099009901No Hit
ATCTTATTTTGGAAGGTTTTATCTATTTTTAATTTATGTCCTCCCGCCTTTCTCATACCCAGCTCCACAAGAAAA10.9900990099009901No Hit
AAACCGAGACTCTCACTATCGGCCTCCTCCCCATGAACTCTGCGTCTGTCTCTTATACACAACTGACGCTGCCGA10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCCTGTCTCTTATACACATCTGACGCTGCCG10.9900990099009901No Hit
TTAATTAAGTCTGCTGCTACACTCGCGACGGTGTAAGGGGCGAAGAAACCTGTCAAATAAAAACATCGCACGCTG10.9900990099009901No Hit
ACAACCAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTCTGTCTCTTATACACATCTGACGCTGCC10.9900990099009901No Hit
GCTCTACACTGCCCTCTGGAAAGCCAAACCTCTTCTGAACTACAGCAGTCAGTTCCCGAATCCGCCGGCCCTTCT10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACACCTGTCTCTTATACACATCTGACGCTGCCGACGACT10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGCAGTAATACGACTCACTATAGGGCTGTCTCTTATACACATCTGACGCTGCCGA10.9900990099009901Clontech Universal Primer Mix Short (95% over 22bp)
AACCCAGAGTAGTGAAATTTTAAAATTAAATTTAGTATTATTTGATCTGTATCTTATAAACATATGACGCTGAAG10.9900990099009901No Hit
GTAACAACGCAGAGAAGTTTTTTTTTTTTTTTTGGTTTTTTTTTTAGAAGAAAAAGGGAGGAGAGGGGAGGGGGG10.9900990099009901No Hit
CTGTGCACCTACCCCCGCTGGGACGACTATCCTCACCATCCCTGGGGCGACAACAGCCCTGTCTGTAATGAGTGG10.9900990099009901No Hit
GATAACAAATATTTTTAAATTTTATTTTATATTTAAAAGAATATAAAAGTGTTAATAATAATTAGATATTGTATA10.9900990099009901No Hit
GGTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGTCGCTACGGGTCTGCTCGGAACCGAGCCTCTGCT10.9900990099009901No Hit
GTCTGAGGATGACTTTTTTGAGTTCAAAAGGGGGCGGTGGACGCACCAAGGCACAGTCCTGAGGCTGTCTCTTAT10.9900990099009901No Hit
CAACTTTTAAAAGGCGCTGGGATTCCTCTGCTTCTAGATCAATGCTGGGCTAGAAAAGTAAAGTCTGTTCTATCA10.9900990099009901No Hit
GTATCAACGCAGAGTACATGGGGGAGAATCACTTGAACCCAGAAGGTGGAGGTTGCAGTAAGCCGAGATCACGCC10.9900990099009901No Hit
ATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCTCTCTGCTTCCAGGG10.9900990099009901No Hit
GTCCGAAAGTGTGCCCCCCCCATGTACTCTGCGTTGATACCCGGTCTCTTATACACATATGACGCTGCCGACGAC10.9900990099009901No Hit
CGCTGATCCTCGGCGCTGCGCCGGCGTTGAAGGCCTTTGGCCTGGGTTTTCTGACCAGTGCGGAATGGGACACCG10.9900990099009901No Hit
TAATAAGAGATCAGAGAGATTCTTACGTCTCTGGGGAGCTAGGAAAGTACCTCTTTCCCGTGACACTGGTGATGC10.9900990099009901No Hit
AATCAACGCAGAGTACATGGGGGAATCCTGTGGGCCGTTGAATGTGGCTGCTCGCGGTCGGCGTGCCCCGACGTA10.9900990099009901No Hit
ATCAACGCAGAGTACATGGGCGGCCTGCCCACCGACTTCTGATGCTGCTGCCGGGCCACGACGCCGATGCCGTCC10.9900990099009901No Hit
CTGCTGAAGACGGCTCAGAATCACCCCAAGTTGGTGGAGCTGAAAAATGGGGAGACGTACAATGGACACCTGGTG10.9900990099009901No Hit
GGGGTATTTTTTTTTTTTGGTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGCGGG10.9900990099009901No Hit
GGTTAAAACAGTTCATTAGAATTCAAAATGCGTAATCATCTGTAAGTTGGCACTTGTTAGGCTCTTGTCAGCATT10.9900990099009901No Hit
TAAACAACCAAAGTAAATGGTTATTATTAATAAATAAATATTATATGTTCCGAGCAGACAAACACTCTGCTCTGT10.9900990099009901No Hit
CAGAGTACATGGGCAGTAATACGACTCACTATCTGTCTCTTATACACATCTGACGCTGCCGACGACTAGTCGAGT10.9900990099009901No Hit
ATATTGCACTTGATTTCCAAAAATAAATTAATCCTGTGGCGCGGGCAGCGGCGCGCAGGCCAGGCGCTAGGACTC10.9900990099009901No Hit
GGCTATTACCTCATCCCTTTCACAGGGATTGTGGGACTGCTGGTTTTGGCCATGGGAGCAGTAATGATAGCTCGT10.9900990099009901No Hit
GTAGAAGGAACGGAAACAAAGTTATTTTGCTCGACTGAAAAAGAAAAAACAAGCCAAACAAAATGCAGAGACAGC10.9900990099009901No Hit
CATCGGACGCTGCCGACGAAGAGGCTGGGGTAGCGCTCGGGGGACGCCGGATCCTGAAAACACCACGGGGGGGGG10.9900990099009901No Hit
GTCTCAAGGGTCGTGTGTTTGAAGTGAGTCTTGCTGATTTGCAGAATGATGAAGTTGCATTTAGAAAATTCAAGC10.9900990099009901No Hit
GAGGCAGGGCCGCGCGAAGCCGGAGAGGAGAAGAAGAGAAGGAGGGTTAGGCTGCCAGGCGGGCGAGGCAGTTGG10.9900990099009901No Hit
ACTTTATCCAGTTAAGTACAAGGCCATTGTCTTCCGGCCATTTAAAGGGGAGGTCGTGGATGCTGTTGTCACTCA10.9900990099009901No Hit
CACAGAGATAGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCT10.9900990099009901No Hit
CTCTAGCCCGGCAGATGAAGGCGAAGCGGCGGCGGCCGGACTTGGATGAGATTCACCGCGAGCTGCGGCCTCAGG10.9900990099009901No Hit
GAGTTAACCCTGTAGGCGGAGCTTGCAGTGAGCAGAGATCGCGCCACCTGAGCGACAGCTGTCTCTTATACACAT10.9900990099009901No Hit

[FAIL]Adapter Content

Adapter graph