FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002293840

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002293840
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences225
Sequences flagged as poor quality0
Sequence length75
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10747.55555555555556No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGTATGCCGTCTT94.0TruSeq Adapter, Index 1 (95% over 21bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTNGTCGCGGCTCTT62.666666666666667No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGTCCTTGTCGCGGCTCTT31.3333333333333335No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGTATGCCGTCTTCT31.3333333333333335TruSeq Adapter, Index 1 (95% over 23bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTTTCGCGGCTCTT31.3333333333333335No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCGTGGCCTTGTCGCGGCTCTT20.8888888888888888No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTNGTATGCCGTCTT20.8888888888888888No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGACTCTT20.8888888888888888No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTTCGCTGCTTGGCCTTGTCGCGGCTCTT20.8888888888888888No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACTTTGCGCTGCTTGGCCTTGTCGCGGCTCTT20.8888888888888888No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCGGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT20.8888888888888888No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTTTCCCTCTTTCCCCTCTTAACGCCCCC10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTGGGCCTNGTCGCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACTTTGCGCTTCTTGGCCTTTTCGCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGACTTGTCGCGGCTCTT10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGATCCCACGCGACGATGCACAATCTCGTATGCCGTCTT10.4444444444444444TruSeq Adapter, Index 1 (95% over 21bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGGCTCCACGTTGCGCTGCTTGTCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTAGTATGCCGTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCTTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGATACGAACGTCTGTGTTGTTATCAGCCAAGC10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTNTTCGCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCATCTCCACGTTTCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGTCTCTT10.4444444444444444No Hit
GTCCTTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACTTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCTGGGGGCCCCCTCAGTGA10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGACCTTGTCGCGGCTCTT10.4444444444444444No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATATCGTATGCCGTCTTAT10.4444444444444444No Hit
AAACTCCCTGACCAATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAAACTCGTATGCCGTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCGCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGAGCTGCTTGGCCTNGTCGCGGCTCTT10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGNATGCCGTCTTCT10.4444444444444444TruSeq Adapter, Index 4 (95% over 21bp)
ACACCAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGATACGATGCACAATCTCGTATGCCT10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGCCGATGCACAATCTCGTATGCCGTCTT10.4444444444444444TruSeq Adapter, Index 1 (95% over 21bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTG10.4444444444444444No Hit
GAAGCAGTGGATCTCCGAGCCCACGAGACTAGGCAGGAATTCGTATGCCGACTTCGGCTTGAAAAAAAAAAACAC10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAACACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC10.4444444444444444No Hit
GTCATTGTCACTGGTCATCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTCATTTTCACTGGTCCGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGATTCACAATCTCGNATGCCGTCTTCT10.4444444444444444Illumina PCR Primer Index 4 (95% over 21bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTTCTTGGCCTTGTCGCGGCCCTT10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCAACGAAACTATGCACAATCTCGNATGCCGTCTTCT10.4444444444444444TruSeq Adapter, Index 4 (95% over 21bp)
GTCATTGTCACTAGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGTATGCCGACTTCG10.4444444444444444No Hit
GTCATTTTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCACTGCTTGGCCTTGTCTCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGTACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGATTGGCGTTGTCACGGCTCTT10.4444444444444444No Hit
CTTCAGTGGAACATTCAGTTGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGTATGC10.4444444444444444No Hit
GTCATTATCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CAAGCAAAAGAACAGCCTGTGTCTTATACTCCGAGCCCACGAGACGTGCATTCATCTCGTATGCCGTCTTCTGCT10.4444444444444444RNA PCR Primer, Index 45 (100% over 27bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCATGTCGCGGCTCTT10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACGATCTNGTATGCCGTCTT10.4444444444444444TruSeq Adapter, Index 1 (95% over 21bp)
AAAGTCTCTGACCAATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGTATGCCGTCTT10.4444444444444444TruSeq Adapter, Index 1 (95% over 21bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGTGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CCCCCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGTATGCCGTCTT10.4444444444444444TruSeq Adapter, Index 1 (95% over 21bp)
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTGCACGTTGCGCTGCTTGGCGTTGTCGCGGCGCGT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCTCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GAAGCAGTGGATCTCCGGGCCCACGAGACGGACTCCTATCTCGTATGCCGTCTTCTGCGTGAAAAAAAAAATCTT10.4444444444444444RNA PCR Primer, Index 27 (96% over 28bp)
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATATCGTATGCCGTCTTCT10.4444444444444444TruSeq Adapter, Index 4 (95% over 21bp)
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCAAGAGACGATGCACAATCTCGTATGCCGTCTT10.4444444444444444Illumina PCR Primer Index 1 (95% over 21bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCCCTT10.4444444444444444No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAACCTCGTATGCCGTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCGCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGGGACGATGCACAATCTCGTATGCCGTCTT10.4444444444444444Illumina PCR Primer Index 1 (95% over 21bp)
ACGTCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTTCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGTTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCTGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCGCCACGTTGCGCTGCTTGGCCTTGTAGCGGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCCGCTCTT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGTGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTCATTGTAACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTNGTCGCGGCTCTT10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACGAGCTCGTATGCCGTCGT10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGTTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATAAACATCTACGAGCCCACGAGACGATGCACAATCTCGGATGCCGTATTCT10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCGCAAGATCGTATGCCGTCTTCG10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATTCCGAGCCCACGAGACGATGCACAATCTCGTATGCCGTCTTC10.4444444444444444TruSeq Adapter, Index 1 (95% over 22bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCATCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGGGGATGGGTAGGGGGAT10.4444444444444444No Hit
GTCATTGTCACTGGTGAGCTCCAGCAACTTCTGCGGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CAAGCAATCAGGCCAGTCGCTTATACACATCTCCGAGCCCACGAGACGATGCACAAACGCGTATGCCGTCTTCTG10.4444444444444444No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTGGTCGCGGCTCTT10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCACGTATGCCGTCTT10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATAACATCTCCGAGCCCACGAGACGATGCACAATATCGTATGCCGTCTTCTG10.4444444444444444TruSeq Adapter, Index 4 (95% over 22bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGATTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
CAACCAAACGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTGCCCAATCTCGTATGCCGTCTT10.4444444444444444Illumina PCR Primer Index 4 (95% over 24bp)
GTCATTGTCGCTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.4444444444444444No Hit
GTAGTGCTGCTCGTCCAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT10.4444444444444444No Hit
CTTCTTGTTTTGGAGCACTCAGTTGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGT10.4444444444444444No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAAGCTCGTATGCCGTCTTCT10.4444444444444444TruSeq Adapter, Index 4 (95% over 21bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACATTGCGCTACTTAGCCTTATCGCGGCTCTT10.4444444444444444No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGCACAAGCTCGTATGCCGTCTT10.4444444444444444No Hit

[FAIL]Adapter Content

Adapter graph