FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002294004

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002294004
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112
Sequences flagged as poor quality0
Sequence length75
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTCTGTCTCTTATACACATCTCCGAGCCCACG21.7857142857142856No Hit
ACTTAACGCTAAGCAATATCTTAGTAACCTATTGACTATATTTTTTAAGTAGTTGTATTAATCCTGTCTCTTATA21.7857142857142856No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCT21.7857142857142856No Hit
ATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGG10.8928571428571428TruSeq Adapter, Index 1 (96% over 29bp)
CTTCAGGGGAAAGACACTTACCTTAAGGGACTTGTCAAGGGAAAGTCAGACCCCTATGGAATCATTAGAGTTGGC10.8928571428571428No Hit
GGAAGCAGAGAGAGTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACCTGTCTCTTATACAC10.8928571428571428No Hit
CTCACTGAGCAGAAGGGGGCAAGGGTGCCTTAGCCCTGGCTCAGGCCGTCCAGAGAGCAGCACAAGCACCCAGCA10.8928571428571428No Hit
ACAAAGTACAGTGGCCACTACATATTCTCTTCACCCCAGCTGTCCTGGAAAAGTGAGTATTTCTGAGTTTCTCAC10.8928571428571428No Hit
CCCCGGATCTGTTCCGTCCAAACACTGTTGAAGCAAGAGACAGACCCGCGGGACCGCCGAACTGCCCCCATGTAC10.8928571428571428No Hit
AACTCACTGAGGATGAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGCCAGTACAAGATCCCAGACTGGT10.8928571428571428No Hit
CACCCCATCATTTAATCTTCCAGCACCGGGCAGGAGTCACACCCTATACGTCGACTTTCGTCTTTGCAGAGTGCT10.8928571428571428No Hit
GTACATGGGGGAGCCGGGGCTGTAGCCGGAGTGGAGCGGCTGCCAGCCGAGGAGCAGGCGCGGCCGCGGCGCCAT10.8928571428571428No Hit
GAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCGTAGCGACTGTCTTTCGGCCTCCT10.8928571428571428No Hit
ACGCAGAGTACATGGGCTGGAAGATTAAATGATGGGGTGCAAGCTCTTGACTGAAGTCCCAGTAAACGGCGGCCG10.8928571428571428No Hit
CGTGTTCATAACAGATTCAGAGAGGAAAACACGTCGAAATCTCCAGATAGTGGTGACATTTTCAGCTTGATATGG10.8928571428571428No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACCCCCGCCTGTTTTTTTGGGCCGCCACCCCATTAAAGAGTTTGT10.8928571428571428No Hit
TTTCGCAGCAATTGACGTTACCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGAG10.8928571428571428No Hit
GGCATCAACTGGAATCTTTACACCATTGCATTCTTTTGGCTTCTCTTCCACGCAGTTGACTCTGTCTCTTATACA10.8928571428571428No Hit
CGCTCACTCTGGACACGGACAACGAGTTCTCCTGGCTCCAGGTGCGCAAGGTCATTGAACTGGTGGCCTTCGCGG10.8928571428571428No Hit
GAATGGATTTCGCCTCCAGCGAGTTGTTTTGAACCCTATCACTTTCCCCATGTACTCTGCGTTGATACCCTGTCT10.8928571428571428No Hit
GAGGTTCTGAGGGCACCGAGACAGAGGGTTAAATGAACCAGTGGGGGCAGGTCCCTCCAACCACCAGCACCTGTC10.8928571428571428No Hit
CTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACTGCGCCTGGCCTCTTGGCATCCTTTTTAGAGTGCTCTTAGA10.8928571428571428No Hit
GTTATGGTACCGGCGCGCCACTCTCTTTTCGGAGTTTGGCCGACAGCGTGGCTGTCTCTTATACACATCTCCGAG10.8928571428571428No Hit
GCCCCACGTCGCGCACGCCGCCGCCGCCCTCCTGCTCTTCGGCCTCGTCCTGCTCCTCCTCCGCCTCCTCCTGTT10.8928571428571428No Hit
GTTGGGCAGAATGTCACACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAACCTCAAATTGCGGCA10.8928571428571428No Hit
GGCCTTCTTCCCGCACGCGGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACCCATGTACCTGT10.8928571428571428No Hit
GTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGAGCCCACGAGACATCT10.8928571428571428No Hit
CTCGGGGGCCTCGCCATCCCGGGTGGCAACGGCGCCTGGCGTGCCCGTCATGTCCCTGGACGAGAGGCTGTCTCT10.8928571428571428No Hit
GGTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAT10.8928571428571428No Hit
TATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCTC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGCAGTAATACGACTCACTATCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.8928571428571428No Hit
CTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCCGAGCGTCAGCTCACTCCCCTTCCACCCTCAGCTCTG10.8928571428571428No Hit
CCCTATAGTGAGTCGTATTACTGCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACG10.8928571428571428No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGAATCAACGCAGAGTACATGGGAAGA10.8928571428571428Clontech Universal Primer Mix Long (96% over 26bp)
ATAGAGGGCTGCGTCACTTCTGGGGCCTTCGTGTCCGAGGCCAGCACACCAAGACCACTGGCCGCCGTGGCCGCA10.8928571428571428No Hit
GGAGGAGACAGTGTGGCCATCATTACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA10.8928571428571428No Hit
AGCCTTCTCCCTATAGTGAGTCGTATTACTGCCCATGTACTCTGCGTCTGTCTCTTATACACATCTCCGAGCCCA10.8928571428571428Clontech Universal Primer Mix Short (95% over 21bp)
CTACAAGACCGAGCCCGCCACCGACCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCCGGCAGACGCTGTCTCT10.8928571428571428No Hit
GTCTTTATGTGTGTAACTATCTAGAGAACAAACCAAACCAGAAATGTCTACCCCTGCAAGAGTGAGGACTTTGGG10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCCAAAAAAAAACTG10.8928571428571428No Hit
CCTCCTGCGCCTCTAGCATCTGATTGCATTCGAAGTCGCTGCTCTCGCACAGCCCCTCCAGGATCTCCAGCAGGC10.8928571428571428No Hit
CCTGGAAGCAGAGAAACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCCTGTCTCTTA10.8928571428571428No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG10.8928571428571428Clontech Universal Primer Mix Long (96% over 26bp)
CTCCCTATAGTGAGTCGTATTACTGCCCATGTACTCTGCGTCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.8928571428571428Clontech Universal Primer Mix Short (95% over 21bp)
GGGGCGGGGAGGGGCCGAAAGTTTGCCGGGGGGCGAGAGGAGAGGGCGAGTGCAGCGGCGCGGGCCGGCGGGAGG10.8928571428571428No Hit
GACAGGGTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTCTGTCTCTTATACACATCTCCGAGCCC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTACAATTATGTACTATACAAGCCTCTCACATAAACACAT10.8928571428571428No Hit
GGTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGATTATCTCTGTGTGAATTGTGGTGAGATTTCTGTCT10.8928571428571428No Hit
TATCAACGCAGAGTACATGGGCCCTTGGCACGCGCTTCGACGCGCAGCTTGTTCAAGGCTTCCACGGTGAGGCCA10.8928571428571428No Hit
ACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCCTGTC10.8928571428571428Clontech Universal Primer Mix Long (96% over 28bp)
ATCCTGATGTATGAGGAAAAAGCGAGAGAAAAGGAAAAGCCAACAGGCCCCCCAGCCAAGAAAGCTATCTCTGAG10.8928571428571428No Hit
GGTCTGGGGCCCCGGGCCTCGGCGGCGCTCGCTCCGCTGCTGCGCCGCGAGCTCGCGGCAGCCGCACATTCCAAC10.8928571428571428No Hit
GAGTACATGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCG10.8928571428571428No Hit
GAGTAATGATGGCCACACTGTCTCCTCCAGAGACTCAGCGAAGTTGAAATGTTTGTGATGATGCAATCTCCCCGC10.8928571428571428No Hit
AGGTCACTGTGCTGCGATTGCGGCACCCACTGTCGCTCCGTTCTACCGGTTTGCGGTCCATACCGACCTCCAGCG10.8928571428571428No Hit
GCGGCGAACAGGGCCGAACTGGCGCCATCGACCGCGCCGGTCCCGCCGCCGGCCACCTCGTGCAGGGCGCCGAGC10.8928571428571428No Hit
CAGCCGTCGTGACCGACGTGGCAGCGCAAGCCGCCAAGTCGCAAACGCTCGCGCTGGCCGAGTACCGTGGCCTCA10.8928571428571428No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCT10.8928571428571428No Hit
GAGTACATGGGGAGGGGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCTCCGAGCCCACG10.8928571428571428No Hit
CCGCGTGCGCCAGGCCGCCGCCGCCGGACAGAGCGTGGTTTTCGGTGACGCCGCCAAGGTGCAGAGCCCCCATGT10.8928571428571428No Hit
CGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATCTGTCTCTTATACACATC10.8928571428571428No Hit
ACGCAGAGTACATGGGGAGGGGGCCGAAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACATCTCAGGA10.8928571428571428No Hit
CCCCATGCGGGTGAGACTCTCTGGCAGCACTCATCCTTGCGGGGATCCCGACGAAAAATGCCGAACCCTCTCGCC10.8928571428571428No Hit
GTCCACTGACCGGATGAACTGGCCTGGCTTGGACTTGTCGCTGTGCAGGTTGAAGCCATAGCCACTGGGGCCCTT10.8928571428571428No Hit
TATCAACGCAGAGTACATGGGACTTGGGCTCGCGTCCTCGGCCGCGCCGCGCGGCACCCGGGCCCAGCAGCCGGG10.8928571428571428No Hit
CCCGGAAGGATGGGCCGGTCTCGGAGCCGGAGCTCGTCCCGCTCCAAGCACACCAAGAGCAGCAAGCACAACAAG10.8928571428571428No Hit
CCCGAGGCACGGCCCCAGGCCCTTGAGGGGCGACGCCTCCCCCAGACCCCAAGCGCCCCTCCACGCGTTCACAAA10.8928571428571428No Hit
GAAAGGGGCAGCACAGTCATTTAAACTTGATCCAACCTCTTTGCATCTTACAAAGTTAAACAGCTAAAAGAAGTA10.8928571428571428No Hit
GCTTGGAGCCGTGGGCTCCGTAGCCCGAGTGATAAGCCATGGCCGCGACGCTCGCTGTCCCCGAGGGCCCGCTGC10.8928571428571428No Hit
CATAAACTGCTCGCTTTCTCCGGGAAACTTGCCCCGCCACATACACTTGACTGCGTGGCCAGTTCTTTCGAAGCC10.8928571428571428No Hit
ATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGCTGTCTCTTATACACATCTC10.8928571428571428No Hit
TTCATCTGATAGCCATCTTCCCTGAAGGACATTGCATTCTTCAGCATTAACAGCGTGTAGTTTCTCTCTCTCTTT10.8928571428571428No Hit
TCAGTCTCCCGAGTAGCTAGCACAGGTGCGTACCACATCAGTCTGGCTTATTTTTCCACCCTTCCTAGAAACGGT10.8928571428571428No Hit
GCCACCTCCCCACCACCAAAAACCATTTAGGTACGCCGTTTCACACAAGGTAAGTTCGTCAGAAGTGCTGTCTCT10.8928571428571428No Hit
GCCCGTAGCTGACTCAGCTTCCTCATCTTCATCTCCATCCTCTTCCTCACCATCACCTTCTTCTTCCTCCTCCTC10.8928571428571428No Hit
AGACAGATCGCCGCCCGTGGCGCGCACGCCGAGCACGATCAGCAGCGAGGCGGCGATGGTGGCCAATATGCCGAT10.8928571428571428No Hit
CCCCAGGTGCTCTTTCCATGGTGGTGCCTGCTCATCTTGCTGATGCAAACTAGGAAGTTAGGCTGCATCTCGGAG10.8928571428571428No Hit
GCCGGAGACTGGAGCTGGGTTCGTGGCGGGCCGGCTGATCCGGACGGAGACTCAGTTCAGTGGAGGGTCGGGCGT10.8928571428571428No Hit
CCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGATA10.8928571428571428No Hit
ACGACAAACAGACCTAAAATCGCTCATTGCATACTCTTCAATCAGCCACATAGCCCTCGTAGTAACAGCCATTCT10.8928571428571428No Hit
GAGAGCTCGTGCATCGTGGTGCACTGGTCGCGCTGGGCTACTGGAACGACCCCGTCCGCACCGCGGAGAGGTTCC10.8928571428571428No Hit
ATACCACTACTCTGATCGTTTTTTCACTGACCCGGTGAGGCGGGGGGGCGAGCCCCGAGGGGCTCTCGCTTCTGG10.8928571428571428No Hit
CTTCCATTCTTCACCCAGAGCGTCAGCAGCAACTTCTGTGGCCATACGCTTCTCATAGAAAGTACGAAGTTTGCG10.8928571428571428No Hit
CGGCCACCACAGGAACCTGACCGTCAGGGCTGTGTGTCCACCCAGCGAGGGCCGGGACCAGATGGTTCTGGGAGG10.8928571428571428No Hit
AGGATGGACTCGCCGCTGCACCGTGAAGCTCTCACCAACCCCGTAGTTGTGTCTGCAGTAGGTGTCCACCGCGGC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCTGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACATCT10.8928571428571428No Hit
GGGTTTGCTGTTCGATGCCATGCTGGTCCTGGGTGTGATCTTCGCGACGCTGGCCATTCCCTTCGCCTGCTCCGG10.8928571428571428No Hit
TTTCGGGTCTGCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGGGTTGATACTGTCTCTTA10.8928571428571428No Hit
AAAACTTATCTGCGGTTTCCTCAAGCTCCGCCTGCCCCCTCAGCAGAAGCCCTGTCTCTTATACACATCTCCGAG10.8928571428571428No Hit
CCATTACCCCATACCCCTTATTGCTGCCAAAACCACATGGGCTGGGGGCCAGGGCTGGATGGACAGACACCTCCC10.8928571428571428No Hit
TTCTGACTGTGAATGAGAACCTGTACTTCCAGAGGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCAACCCCCA10.8928571428571428No Hit
GCGCAAAACTGTCACAGCCATGGATGTAGTATATGCCCTGAAACGTCAGGGGCGCACTCTGTATGGCTTCGGCGG10.8928571428571428No Hit
CCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCACGA10.8928571428571428No Hit
TGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGGGTGTGGGCTG10.8928571428571428Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACATC10.8928571428571428No Hit
GTCCCGTTCTGTCGCCCAGGCTGGAGAGCGGTGACGCCATCTTAGCTCACTGCAATCTCCACCTCCTGTCTCTTA10.8928571428571428No Hit
GTCTCCCAATGTTGCCTAGGCTGTTCTTGAACTCCTGGGCTCAAGCAATCCTCCCGCTGTCTCTTATACACATCT10.8928571428571428No Hit
AACATGGTGAAACTCCATCTCTACTAAAAATACAAAAAGTTAGTCGGGCATGGTGGCGGGCGCCTGTAGTCCCAG10.8928571428571428No Hit
GTCTCTTCCTCCTTGGATAAAGTCTTGATGATCTCCTCCTTCTTGGCCTGGAGGCGCTCTTCACGGCGCTTGCGT10.8928571428571428No Hit
GATGGGGGAGGGGCTGGGGGCTGAAGGGAGCAAGAAAGCTGTAGCTGTGTGGGGCTGGCAGGATGTTGAAGACCG10.8928571428571428No Hit
CTTCTTATGCTCCTCCCGACAAGTTTGCACAAAAAATGCATATGATGACATTTTGCCTCTCGGCTTCTTAGGATC10.8928571428571428No Hit
GACCCGTAGCGACTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTCTGTCTCTTATACACATCTCCGAGCCCAC10.8928571428571428No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCGCGCGGGGCCCCCTTGTAAATGGGGTTGTAAAAGTGGT10.8928571428571428No Hit
GCTTAATCTTTAGGCTTTGAAGACCGGGGATCTTAAAATGGCTCTGGAGGAGCTGAGGTAGCTTTGCTCCTGTCT10.8928571428571428No Hit
ATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGATACCACCTGTCTCTTATACACATCTCCGAGCCCACGA10.8928571428571428Clontech SMART CDS Primer II A (95% over 21bp)
GGGTAGGCAAGAAAGGAAAACGACGCTGGAGAGCCGGAGACGATTTGAGGAGGCAGAACGACCCCTGTCTCTTAT10.8928571428571428No Hit
GTATGTGGAAAGAATGAAGGAAAAACAAGACAAAATCTACTTCATGGCTGGGTCCAGCAGAAAAGAGGCTGAATA10.8928571428571428No Hit
GACCTGCTGAAGCTGAACGTGGCCCCCCTCGCCGTCTTCCAGATGCTCAAGTCCATGTGTGCCGGGCAGAGGCTG10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGCGGGAGAGCGGGAGTTCATTTATCTACTTTACAGCAGGCTCTCTGCTGTCAAT10.8928571428571428No Hit

[FAIL]Adapter Content

Adapter graph