FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002294222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002294222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112
Sequences flagged as poor quality0
Sequence length75
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCTGACGCTGCCGACG32.6785714285714284No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCT32.6785714285714284No Hit
GTGAATGAGAACCTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCGACACCCCCATGTACCTG21.7857142857142856No Hit
GTATCAACGCAGAGTACATGGGGGTGTGGGTCTTGTCGCAGCTCTTGGGCTCGCTTCCGCCTGTCTCTTATACAC10.8928571428571428No Hit
ATGCAATAGCGCTCCCCCGTGGGTGCGGGACCGTCAGGGAACACATGGCCCAGGTGGCTGCCGCAGTTGTTGCAG10.8928571428571428No Hit
GAGTACATGGGGGTGTGGGTCTTGTCGCAGCTCTTGGGCTCACTTCCGCTCTGGAAGTACAGGTTCTCATTCACA10.8928571428571428No Hit
CGCGAATAGAGTAGGGCGGGACACGTGAAATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTGTCTCTTAT10.8928571428571428No Hit
CAACATACGAGGAAACAAAATCAAGAATATAACAGAGAGAATTGAGCAGAAAAATTTCTATTATAAACATCTGAC10.8928571428571428No Hit
GAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCTGCCG10.8928571428571428No Hit
ATTGTGACTGTGAATGAGAACCTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCCC10.8928571428571428No Hit
GTATCAAAGCAGAGTACATGGGCAGTAATACGACTCACTATAGGGAGAAGGCTCTAACAACCCCTGTCTCTTATA10.8928571428571428Clontech Universal Primer Mix Short (95% over 21bp)
CCCATAGCCAGCCCTCCGTCACCTCTTCACCGCACCCTCGGACTGCCCCAAGGCCCCCGCCGCCGCTCCAGCGCC10.8928571428571428No Hit
GACAGTCGCTACGGGTCTGCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACC10.8928571428571428No Hit
ACAGGTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCTGTCTCTTA10.8928571428571428No Hit
CCCTTCTGACTGTGAATGAGAACCTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTTACAAGCCTGTCTCTTATACACATC10.8928571428571428No Hit
ACGAAGAGTAAATAGGAGTGTAAGTCTTATAGAAAATATTAAAATCATTTCCAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
GACTTGGCGCGACGGTCCGAAGGGCTTCAACGCCGAGATCTACAAATCTTCGGTCTTATCAGGGCTCACCGGGAG10.8928571428571428No Hit
GAGGTAACACCGCAGAGTAAATGGGGAGGAGGCCGAAAGACAGTCGCTAAGGTTCTGCTCGGAACCGAGCCTCTG10.8928571428571428No Hit
GAGTACATGGGGGTGTGGGTCTTGTCGCAGCTCTTGGGCTGTCTCTTATACACATCTGACGCTGCCGACGACGGA10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATCTGTCTCTTATACACATCTGACGCTGCCGACGAC10.8928571428571428No Hit
GGTATCAACGCAGAGTACATGGGGGGGGGGACACTTTCGGATATCTGGTCGACCTCCAGCCTGTCTCTTATACAC10.8928571428571428No Hit
ATGTTGGCCCCCGAAGCGCACGGATGCCATGTAGGGCCTGGAGTGGGGGGTCACCTCGTGGCCCCCGATGATCTG10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCTGTCTCTTATACACATCTGACGCT10.8928571428571428No Hit
CCCAAGAGCTGCGACAAGACCCACACCCCCATGTACTCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGA10.8928571428571428No Hit
GCTGACATGGTGGGGACTGTGGCAGCCCCTGGGTGCACAAAGCTCGGACGATAGAGCTCTGAGTAGGCAGGTGGA10.8928571428571428No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATCTGTCTCTTATACACATCTGA10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCCAAAAACTGTCTC10.8928571428571428No Hit
TATCAACGCAGAGTACATGGGGGTAACGTCAATTGCTGCGCTGTCTCTTATACACATCTGACGCTGCCGACGACG10.8928571428571428No Hit
TTAAAAACACAGCACTCTGCAAAGACGAAAGTCGACGTATAGGGTGTGACTCCTGCCCGGTGCTGGAAGATTAAA10.8928571428571428No Hit
GTACATGGGGGGGACACTTTCGGACATCTGGTCGACCTCCAGCATCGGGGAAAAAAACTGTCTCTTATACACATC10.8928571428571428No Hit
GCATTTGCCCGTGCTGCTACAACAGGGTGCCAAGCTATCGGGCGCTTGGACTTGGCCATTGAATTGGCGAGGGTC10.8928571428571428No Hit
GTACATGGGGGTGTGGGTCTTGTCGCAGCTCTTGGGCTCGCTTCCGCTCTGGAAGTACAGGTTCTCTTTCACAGT10.8928571428571428No Hit
ACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGACTGTCTCTTATACACA10.8928571428571428No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.8928571428571428No Hit
TGAGAACCTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCCTGTCTCTTATACACA10.8928571428571428No Hit
ATCAACGCAGAGTACATGGGGAGGGGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCGAAAAACTGTCTCTT10.8928571428571428No Hit
GGAGAGTGTGATCACAAGAGAGATGGTGGAGATGCTCTTTTCTGATGATTCTGACCTGCAGTTAGCAACCACACA10.8928571428571428No Hit
CCTCTGTCTTTCGGCCTCCTCCCCATGTACCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGTGT10.8928571428571428No Hit
TCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.8928571428571428No Hit
TTTTTTCCCCCGGTGCTGGAGGTCGGCCCGAGGGCCGAAAGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.8928571428571428No Hit
GCTGGAGGTCGACCAGATGTCCGAAAGTGTCCCCCCCCCATGTACTCTGCGTTGATCTGTCTCTTATACACATCT10.8928571428571428No Hit
TCCTTGCTGAAAGACAAGTCTGAATGCTCCACTTTTTCAATTCTCTCTCCATTCTTCAGTAAGTCAACTTCAATG10.8928571428571428No Hit
CTCCTCCAGAGACTCAGCGAAGTTGAAATGTTTGTGATGATGCAATCTCCCCGCGGAAAGACGGCTGTCTCTTAT10.8928571428571428No Hit
CCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCGTAGCGACTGTCTTTCGGCCTCCTCCCCATGTACCTGTCTCT10.8928571428571428No Hit
GTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG10.8928571428571428No Hit
GCCAAAAAAAAAAATCTAAATTAAAAACAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCGTAGCGACTGTCC10.8928571428571428No Hit
CAGATCTTGGGCTCGATTCAGCTCTGGAAGTAAAGGTTATCATTCACAGTCAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
CTGTTTATTCAGGTGGTTTTCACAATCAGTTCCTTGGGCTTGAGGCTACTAAGTAAAGCAATCTTAGCCCTTGGT10.8928571428571428No Hit
GCCCAAGAGCTGCGACAAGACCCACACCCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGTGTA10.8928571428571428No Hit
GGTCTGCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCCTGTCTCTTATACACATCTGACGCT10.8928571428571428No Hit
ACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCTCTCTGCTTCCAGGGGCTG10.8928571428571428No Hit
AGCTGAAAGTATCACTTGGTACACAAACTGCTTTTTGCACTACAACCTCCAGAAGAAAGCGAACGCAATTCCCCA10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGGAATTGACGGGGACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGA10.8928571428571428No Hit
GAATGAGAACGTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCCTGTCTCTTATAC10.8928571428571428No Hit
GTACATGGGGAGGAGGCCGAAAGACAGAGGCTCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAG10.8928571428571428No Hit
AGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGA10.8928571428571428No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGGAGGAG10.8928571428571428Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCCTGTCTCTTATACACATCTGACGCTG10.8928571428571428No Hit
AGCCTGGGGGTGAGCCCCGAGCGCGAGCACCTGCTGCGGACGGACCCCGCCGGCGCCTTCCTGGGAGCGCTGTCT10.8928571428571428No Hit
GTGGTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGATCTGTCT10.8928571428571428No Hit
GTAGAGTGGTGGACGAAGGGAGGATGGATGGTCTTCGTGTACAAAGCTGCTGTGGCCACAGGAGCTGCTGGGCCG10.8928571428571428No Hit
GATGATGATGATGGCCTTGCCCTTCCTGGCGCCGCCGACCTTCTCCACGGCACCGGCCGTGGTGCTGTCTCTTAT10.8928571428571428No Hit
CCCATGTACTCTGCGTTGATACCCATGCTAAGCAACTAATCTGAGTCTAGCCCCCAGCTAACGCCTTGTACTCTG10.8928571428571428No Hit
CCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTCTGTC10.8928571428571428No Hit
TAGAACAAAAAAAAAAAACAAAAAAAAAAAAAAACAAAAACAAACAAAACCAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
GGCCATCACCACCTGGCTGTGGGGCGGCTTCGTCGTCGGCGGGGCGACGTTGAACCGCTTCTTCTCGCTCCACTA10.8928571428571428No Hit
CATCTGACGCTGCCGACGACTAGTCGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAAGGGGGGGGG10.8928571428571428Illumina Single End PCR Primer 1 (100% over 31bp)
CAATTCACACAGAGATAGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCCTGTCTCTTATACACATCTGACGCTGCCG10.8928571428571428No Hit
GTGGTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTGTCTCTTATACACATCTGACGCTGCCG10.8928571428571428No Hit
ACATGGGGTCGATCTGGCCGTTGCCGTTGGCCACGCCCTTTTCGGCCAGCGCGGTCTGCTTTTCGGACAGCGACA10.8928571428571428No Hit
ATGAAATCCATAAAACAGATAGACCACAACGAATATCAGGGCTCGAAACCTAACCCATGTACTCTGCGTTGATAC10.8928571428571428No Hit
GGTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.8928571428571428No Hit
GTCTTTCGGCCTCCTCCCCATGTACTCTGCGTCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGT10.8928571428571428No Hit
ACGCAGATAACGAGTATTATAATTAAAGAAAATTTAAAATATCCTGGAGGAATTAAAGCCGGGAATAATATACCC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGGGGGGGACACTTTTCGGACATCTGGTCGACCCTGTCTCTTATACACATCTGA10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCCTGCTGTCTCTTATACACATCTGACGCTGCC10.8928571428571428No Hit
CAGTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCTGCCGAC10.8928571428571428No Hit
CAAAAAACGCAGACTACAAACTCTAGTGTGTATATAACCATCTAATCCGATACATTACAATCAAAAAGTACAGGT10.8928571428571428No Hit
GGTCTGCTCGGAACCGAGCCTCTGTCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAGAGTGTAGAT10.8928571428571428No Hit
GTCTTGTCGCAGCTCTTGGGCTCGCTTCCGCTCTGGAAGTACAGGTTCTCATTCCTGTCTCTTATACACATCTGA10.8928571428571428No Hit
ACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGCGCAGACCAAGTCTCTGCCTGTCTCTTA10.8928571428571428No Hit
GGGACACTTTCGGACATCTGGTCGACCTCCAGCATCGGGGGACTGTCTCTTATACACATCTGACGCTGCCGACGA10.8928571428571428No Hit
AACCTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCCCATGTACCTGTCTCTTATA10.8928571428571428No Hit
GAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATCTGTCTCTTATACACATCTGACGCTG10.8928571428571428No Hit
ATCAACGCAGAGTACATGGGGGTGTGGGTCTTGTCGCAGCTCTTGGGCTCGCTTCCGCTCTGGAAAAAACTGTCT10.8928571428571428No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCATGTACTCTCTGTCTCTTATACACATCTGACGCTGCCGA10.8928571428571428No Hit
TATCAGAGCAGAGTAGGTGTTTATAGTTTTGTTTTTTAGAGGGGACGCCGGATGGCATCCCAGGAGGGGAATGCC10.8928571428571428No Hit
ATCAACGCAGAGTACATGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCTGAC10.8928571428571428No Hit
GTACATGGGGCTGCCACCGGTGTGCCGCTGCACATCAAGCTGGGCCTGGACCCTGTCTCTTATACACATCTGACG10.8928571428571428No Hit
GTACATGGGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGATTCCTGTCTCTTATACACATCTGAC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGATTTTGGTGT10.8928571428571428No Hit
GGTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATC10.8928571428571428No Hit
GTGAATGAGAACCTGTACTTCCAGAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCCCATGTACCTG10.8928571428571428No Hit
GTACATGGGGGGGGGACACTTTCTGACATCTGGTCGACCTCCAGCCTGTCTCTTATACACATCTGACGCTGCCGA10.8928571428571428No Hit
TCGCAGCTCTTGGGCTCGCTTCCGCTCTGGAAGTACAGCTGTCTCTTATACACATCTGACGCTGCCGACGACGGA10.8928571428571428No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCCTGTCTCTTATACACATC10.8928571428571428No Hit
CTCGGAACCGAGCCTCTGTCTTTCCGGCCTCCTCCCCATGTACCTGTCTCTTATACACATCTGACGCTGCCGACG10.8928571428571428No Hit
CCCGTAGCGACTGTCTTTCGGCCTCCTCCCCATGTACTCCTGTCTCTTATACACATCTGACGCTGCCGACGACGG10.8928571428571428No Hit
GTCTTGTCGCAGCTCTTGGGCTCGCTTCCGCTCTGGAAGTACAGGTTCTCATTCACAGTCGCTACGGGTCTGCTC10.8928571428571428No Hit
CTCCTGACCTCAGTTGATCCACTTGCTTCAGCCTCCCAAAGTGCTGGGTTTATAGGCATGAGCCAAAACGCCCAG10.8928571428571428No Hit
GTATCAACGCTGAGTACGTTATTTTTGGTTTTTTTTTTTTTTTTTTAAGTAACATGAAAAAAAATAGGGGGGGGG10.8928571428571428No Hit
GGTATCAACGCAGAGTACATGGGCAGTAATACGACTCACTCTGTCTCTTATACACATCTGACGCTGCCGACGACG10.8928571428571428No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACTGTCTCTTATACACATCTG10.8928571428571428No Hit
GTATCAACGCAGAGAACATGGGACTCTCTGCTACCAGGGGCTGTCACTTATACACATCTGACGCTGCCGACGACG10.8928571428571428No Hit

[FAIL]Adapter Content

Adapter graph