FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002294778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002294778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences876
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCC495.5936073059360725No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCG485.47945205479452No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTT485.47945205479452No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCG475.365296803652968No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGC465.251141552511415No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC424.794520547945205No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTG414.680365296803653No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGA394.4520547945205475No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCT343.881278538812785No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGT333.767123287671233No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATT323.65296803652968No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAA313.5388127853881275No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAG232.6255707762557075No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAG202.28310502283105No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAG202.28310502283105No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGATGCACAATCTCGT192.1689497716894977No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGG192.1689497716894977No Hit
TGAATGAGGTCAAGAGGATCTGGTGAGCCCTGGCAGAGAGGACTTATATA192.1689497716894977No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAAT171.9406392694063925No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGC161.82648401826484No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGC161.82648401826484No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTT161.82648401826484No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAG151.7123287671232876No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGT141.5981735159817352No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAAT111.2557077625570776No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCT91.0273972602739725No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC91.0273972602739725No Hit
CCTGACTCACGTTTCCTTATTGCTGGGATGTTCACAGAGCCAACGTCCTG91.0273972602739725No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCG91.0273972602739725No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACGATGCACAATCTCGTATGCCG60.684931506849315No Hit
TGGAATAAGTTCAGTCTCACAGCATTTTACTGACACCGGGTCATTCTTTT50.5707762557077625No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC40.45662100456621No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAAACCA30.3424657534246575No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGATGCACAACCTCGT30.3424657534246575No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAACCAC20.228310502283105No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGT20.228310502283105No Hit
AACTGTAGCTTACACTAACTCCGAGCCCACGAGACGATGCACAATCTCGT20.228310502283105No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAACCAA10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCGAGCAAACGAGACGATGCACAATCTCGT10.1141552511415525No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCGGTG10.1141552511415525No Hit
ACTGTAGCTTACACTGACTCCTTATACACATCTCCGAGTCTACGGACGAT10.1141552511415525No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGT10.1141552511415525No Hit
GGTGTAGTCTCCTCTCTGTCTCTTGTACACATCTCCGAGCCCACGAGACG10.1141552511415525No Hit
CCCTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAAT10.1141552511415525No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCT10.1141552511415525No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTTGACATT10.1141552511415525No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACAGATCTCCGAGCCCACGAGAC10.1141552511415525No Hit
GTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCC10.1141552511415525No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATCCCCATTT10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGCCGA10.1141552511415525No Hit
CCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTTGGAAGATCTCGT10.1141552511415525No Hit
CAAGCAAGCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTGCTCATAAG10.1141552511415525No Hit
GTCATTGTCACTGGTCAGCTCCGAGCCCACGAGACAATGCACAATCTCGT10.1141552511415525No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCAACCACAATGCTGGCGGGGACCG10.1141552511415525No Hit
CAGTGCATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTT10.1141552511415525No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGTGTCTCCACGTTGC10.1141552511415525No Hit
GTAGTGCTGCCCGTACAGGTAGCAGGCCACCACAATGCTGGCGCGGACCG10.1141552511415525No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACGATGCACCAATCTCGTATGCC10.1141552511415525No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGCTTTGC10.1141552511415525No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATTCGAGCCCACGAGACGA10.1141552511415525No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGCTCGGTAGTAACTGTG10.1141552511415525No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACGATGCACAAATCTCGTATGCC10.1141552511415525No Hit
TTTCAGGTTAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGC10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGAAAGCGTGTATCTCGTA10.1141552511415525No Hit
CAACAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGC10.1141552511415525No Hit
GAAGATGCTGATTCTCTCGCAGGAACTCACCCACTCATCCTGCAAAGCTT10.1141552511415525No Hit
AAAGTCTCTGACCAATCTGTCTCTTAACACATCTCCGAGCCCACGAGACG10.1141552511415525No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGCGCCCACGTTGCTCTTGCCACT10.1141552511415525No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCCTGGTCACTGT10.1141552511415525No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTAGTGGCCACTTCTACAAT10.1141552511415525No Hit
TCTCGTGCTCGCAGATGCCGATGCGGACCATGAGCTTCTCCAGCTTGCCC10.1141552511415525No Hit
GCAAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGATTCAGCACCGC10.1141552511415525No Hit
GGCTGTGGTGTGATTCCGGGTGGCGACCGTAGCGCACCATTTGCACCCGC10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCGTGCCCACGAGTCGATGCACAGAGTCGT10.1141552511415525No Hit
ACATCAGCCTCTTTATCTCAGCATTGACAAAAGCCACCGCAGCAATAAGC10.1141552511415525No Hit
CCTGACTCACATTTCCGAGCCCACGAGACGATGCACAATCTCGTCTGCCG10.1141552511415525No Hit
GCACAGATCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCG10.1141552511415525No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTTGCCACTGT10.1141552511415525No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTCTCTCTCT10.1141552511415525No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTTTGCAAT10.1141552511415525No Hit
GTAGTGCTGCTCGTACAGGTAGCAGACCACCACAATGCTGGCGGGGACCG10.1141552511415525No Hit
GTACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCG10.1141552511415525No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACGATGCACAAACTCGTATTCCG10.1141552511415525No Hit
TAAAATAGTAGCCCCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGC10.1141552511415525No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTACAAAGCTT10.1141552511415525No Hit
CTTCTTGTTTTGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTC10.1141552511415525No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACGCATCTCCGAGCCCACGAGAC10.1141552511415525No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACCGT10.1141552511415525No Hit
GCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCA10.1141552511415525No Hit
CTTTGCAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTT10.1141552511415525No Hit
CTGTTTTCATCCCACAGGTTGTTATTTTGTACTTTGAGCCAAGCACATTT10.1141552511415525No Hit
TGAATGAGGTCAAAAGGATCTGGTGAGCCCTGGCAGAGAGGACTTATATA10.1141552511415525No Hit
CTTTGACAGCATCACGAGTTTCACCGGCATCACCAATGCCATACTCATTT10.1141552511415525No Hit
TCTCGTGCTCCCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCG10.1141552511415525No Hit
GGCTGTGGTGTTAGTCCGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCA10.1141552511415525No Hit
CAAGCAATCAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGC10.1141552511415525No Hit
GCACAGGTCGTTTACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCG10.1141552511415525No Hit
GTCATTGTCACTGGTCAGCTCCGAGCCCACGAGACGATGCACAACTTCGT10.1141552511415525No Hit
ATAGCAGAACATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTC10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGGATAACAATCTCGT10.1141552511415525No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCATCCACTCATCCTGCAAAGCTT10.1141552511415525No Hit
CAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAA10.1141552511415525No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGCTTGCCCTCTGTGGATTTGC10.1141552511415525No Hit
AACTGTAGCTTACATGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAA10.1141552511415525No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGATGTTTGCCCTCTGTGGATTTGC10.1141552511415525No Hit
GTCATTGTCACTGGTCAGCTCCGAGCCCACGAGACCATCGACCATCTCGT10.1141552511415525No Hit
CAACCAAAAGAACAGCCTGTCCCTTATACACAACTCCGAGCCCACGAGAC10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGATGCACAAACTCGT10.1141552511415525No Hit
CTTTGAAAGCATCACGAGTTTCACCGGGATCACCAATGCCATACCCATTT10.1141552511415525No Hit
ATCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC10.1141552511415525No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCC10.1141552511415525No Hit
ACATCAGCCTCTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGC10.1141552511415525No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGTCCACGAGACGA10.1141552511415525No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCTCTTGCCGCCTTCCCATAAG10.1141552511415525No Hit
TCAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTG10.1141552511415525No Hit
TAAAATAGTACCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTG10.1141552511415525No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGCTGAGGCCGTGGTAGGGCCGG10.1141552511415525No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACCATCTCCGAGCCCACGAGACG10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGATGCACAACCTCGC10.1141552511415525No Hit
AACTGTAGTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAA10.1141552511415525No Hit
GACACTTGGCCTGGAGTACGGTGATGGGGTTGAGGCTGTGGTAGGGCCGG10.1141552511415525No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCTTCC10.1141552511415525No Hit
AAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGC10.1141552511415525No Hit
GTAAAAGTTGAAATGTCAGGGCCCACGAGACGATGCACAAGCTCGTATGC10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCATGGAACAGTTTCTCCCCAATGAGACGA10.1141552511415525No Hit
CCTGACTCACGTTTCCTTATACACATCTCCAAGCCCACGAGACGATGCAC10.1141552511415525No Hit
GTCATTGTCACTGGTCAGCTCCAGCACATTCTGCTGCGTCTCCACGTTGC10.1141552511415525No Hit
TGGAATAAGTTCAGTCTCACAGCATTTTACTGGCACCGGGTCATTCTTTT10.1141552511415525No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGATGCACCATCTCGT10.1141552511415525No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGTGGAGAA10.1141552511415525No Hit
TTTCAGGTCAGATCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGC10.1141552511415525No Hit
ATAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCG10.1141552511415525No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTTCAACTTTTGATGGTCGACATT10.1141552511415525No Hit
ATAGCAGAGTCGTCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCT10.1141552511415525No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACCAGAC10.1141552511415525No Hit

[FAIL]Adapter Content

Adapter graph