FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002294973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002294973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44
Sequences flagged as poor quality0
Sequence length75
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG511.363636363636363No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT49.090909090909092No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT36.8181818181818175No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC24.545454545454546No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG24.545454545454546No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC24.545454545454546No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTACAGCGTCTCCTCCCGGGTGCGGGGGGCCCCCGCAGTGA12.272727272727273No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGTTCCGGTCGGTAGTACCTGTGCACCACTTCTTACCCTGCGCACATG12.272727272727273No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGCGGACCTTGTAGAGCAGCGNGAAGATGCCGAT12.272727272727273No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG12.272727272727273No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT12.272727272727273No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATC12.272727272727273No Hit
CCTTTAACAAGTATGCCTGTCAGCATCACACCGGTGACCAGTCCTGAGGCTAGCACCCTTTCAACAACTCCTGTT12.272727272727273No Hit
ATAGCAGAGTCGTCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTCCCCCTGCACCAGGGGAAGCAGTGG12.272727272727273No Hit
TAAAATAGTCGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTACCCCTGCGCACATG12.272727272727273No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGC12.272727272727273No Hit
CAGTGACATGTATGCCCCCTCTTACCTTAGGGCTGTGATTCTTTCTCGCTGCTTTTTTCTTCCTGGCAGTATTAT12.272727272727273No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGNGAAGGGGCCCTG12.272727272727273No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC12.272727272727273No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACGCAGCACCACCTGGCAGGTCGCGAGGGGGCCCTG12.272727272727273No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCATACACTCGGAAGAAGTAGG12.272727272727273No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGACGGGGCCCTG12.272727272727273No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGTTGGGGCGGTAGGCTGCGCGGGGCCCGCGCCCC12.272727272727273No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCGCTTGGCCTTGTCGCGGCTCTTG12.272727272727273No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA12.272727272727273No Hit
GCACAGGTCGTATACGCATTGGCGGAGGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGTCCCTG12.272727272727273No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG12.272727272727273No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTGTGTCCGCAATGAGACGAACGGCAGTGTTGTTATCAGCCAAGC12.272727272727273No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCAGGCAA12.272727272727273No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCGCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC12.272727272727273No Hit
TAAAATAATAGCCCTCCCGCACTCACCAGGTCCGGTCGGTGGTACCTGTGCACCACTTCTGCCCCTGCGCACCTG12.272727272727273No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGATGTGATTCTTTCTCTAGTCTTGTTTCGTACTGGCAGTATTAT12.272727272727273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)