FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002294998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002294998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences571
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC6611.558669001751314No Hit
TTTCAGGTAGGTGGACCTGTCTCTTATACACATCTCCGAGCCCACGAGAC345.954465849387041No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCG345.954465849387041No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCC264.553415061295972No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCG254.378283712784588No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC213.677758318739054No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC213.677758318739054No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGC183.1523642732049035No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACGA172.9772329246935203No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGC162.8021015761821366No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGA162.8021015761821366No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCG152.626970227670753No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCT152.626970227670753No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTG142.4518388791593697No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGT101.7513134851138354No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTT101.7513134851138354No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAG91.5761821366024518No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAA91.5761821366024518No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGC81.4010507880910683No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAG81.4010507880910683No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAAT81.4010507880910683No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATT71.2259194395796849No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAG71.2259194395796849No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGG71.2259194395796849No Hit
TGAATGAGGTCAAGAGGATCTGGTGAGCCCTGGCAGAGAGGACTTATATA61.0507880910683012No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGT50.8756567425569177No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACAACCAACGATCTCGT50.8756567425569177No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTT50.8756567425569177No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAG40.7005253940455342No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAACCAC30.5253940455341506No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCT30.5253940455341506No Hit
GTTTCCAGGTCAAGGGTAACGGAACGTGGACCAAGTCCCGCGTCTCCTCC30.5253940455341506No Hit
GTAAAAGTTGAAATGTCAGGGCCCACGAGACCCACGTATATCTCGTATGC30.5253940455341506No Hit
CTGTTTTCATCCCACAGGTTGTTATTTTGTACTTTGAGCCAAGCACATTT30.5253940455341506No Hit
GGTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTG20.3502626970227671No Hit
CTTCTTGTTTTGGAGCACTCAGTTGTCTGTCTCTTATACACATCTCCGAG20.3502626970227671No Hit
CCTGACTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGT20.3502626970227671No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAAT20.3502626970227671No Hit
CCTGACTCACGTTTCCTTATTGCTGGGATGTTCACAGAGCCAACGTCCTG20.3502626970227671No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACAACCAACGATCTCGTATGCCG20.3502626970227671No Hit
TGGAATAAGTTCAGTCTCACAGCATTTTACTGACACCGGGTCATTCTTTT20.3502626970227671No Hit
CTGGAATCCGAGCCCACGAGACGATGCACAATCTCGTATGCCGTCTTCTG10.17513134851138354RNA PCR Primer, Index 1 (95% over 24bp)
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCCCCACGTTGC10.17513134851138354No Hit
GTAGTGGCTGCTCATCGGGCTGTCTCTTATACACATCTCCGAGCCCACGA10.17513134851138354No Hit
TTTCAGGTAGGTGGACCTGCTCTTTACACATCTCCGAGCCCACGAGACGA10.17513134851138354No Hit
GTAGTGGCTGCTCATCGGGCTTCTCTTATACACATCTCCGAGCCCACGAG10.17513134851138354No Hit
CAAGCAATCAAGGCCAGTCTATTATACAGATCTTGCAGCCTACGCATCGG10.17513134851138354No Hit
GGCTGTGGTGTGAGTCCGGGTGGAGGCCGTAGCGCGCCATTTGCACCCGC10.17513134851138354No Hit
CGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGC10.17513134851138354No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACAACCAAGGAGGTCGT10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACCAAGCGATACCCCGTATGCCG10.17513134851138354No Hit
AACTGTAGCTTACACTGACTCCGAGCCCAGAGACCCACGTATAACTCGTA10.17513134851138354No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGCTGC10.17513134851138354No Hit
CCTGACTCACATCTCCGAGCCCACGAGACGATGCACAATCTCGTATGCCG10.17513134851138354No Hit
CGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTT10.17513134851138354No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATATCCGAGCACACGAGAC10.17513134851138354No Hit
TTTCAGGTAGGTGGACCTGTCTTTATACACATCTCCGAGCCCACGAGACG10.17513134851138354No Hit
TTTCAGGTAGGTGGACCTTTCTCTTATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACCATCGACCATCTCGT10.17513134851138354No Hit
GTAGTGCTGCTCATCGGGCTGTCTCTTATACACATCTCCGAGCCCACGAG10.17513134851138354No Hit
ACACCAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACG10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACCCACGTATATCTCGTATGCCG10.17513134851138354No Hit
CAGTGACATGTATTCCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTC10.17513134851138354No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCACTAGCCCTCCTTGGTCACTGT10.17513134851138354No Hit
ATGCTCAGTTGTCTGTACACATCTCCGAGCCCACGAGACGATGCACAATC10.17513134851138354No Hit
GGCTGTGGTGTGAGTCTGGGACTTGAACTCTGTCTCTTATACACATCTCC10.17513134851138354No Hit
AAAGTCTCTGACGTGGATGAGCTTGGGAGTGTGGAAGCTCAGGAGGAGAA10.17513134851138354No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCTACGTTGC10.17513134851138354No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACAACCAACGAGCTCGT10.17513134851138354No Hit
CCTTTAACAAGTATGTCTGTCAGCACCACACTGGTGGCCACTTCTACAAT10.17513134851138354No Hit
CCAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGAAGTTTGCCCTCTGTGGATTTGC10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACAAGCGTGTACCTCGTATGCCG10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACACCATTCAACCTCGTATGCCG10.17513134851138354No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGAGCCATTTGCACCCGC10.17513134851138354No Hit
CACCCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
GTCATTGTCACTGGTCAGCTCCAGCACTTTCTGCTGCGTCTCCACGTTGC10.17513134851138354No Hit
GTTTCCAGGTCAAGGGTAACGGAACGTGGACCAAGTCCTGCGTCTCCTCC10.17513134851138354No Hit
CAACCAAAAGAACAGCCTGTCCCTTATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACACCTCCGAGCCCACGAGAC10.17513134851138354No Hit
CGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGC10.17513134851138354No Hit
TTTCAGGTAGGTGGACCTGTCTCTTATACACATCTACGAGCCCACGAGAC10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACCCACGTAGGGCCTGTATGCCG10.17513134851138354No Hit
CTTCAGGTAGGTGGACCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGCC10.17513134851138354No Hit
AACTGTAGCTTACACTGACTCCGAGCCCCACGAGACAACCAACGATTTCG10.17513134851138354No Hit
CAGGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTC10.17513134851138354No Hit
AAAGTCTCTGACCAATCTGTCTCTTATACACATATCCGAGCCCACGAGAC10.17513134851138354No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACGATGCACAATCTCGT10.17513134851138354No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACCCACGTATATCTCGT10.17513134851138354No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCCCCGGGGCGGCAGGTGGGGCG10.17513134851138354No Hit
TTTCAGGTGGGTGGACCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCAATTGCACCCGC10.17513134851138354No Hit
TGATGAGGTCAAGAGGATCTGGTGAGCCCTGGCAGAGAGGACTTATATAA10.17513134851138354No Hit
AAAGTCCCTGACCAATCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
AGCCAAAGGGTCTAAAGAAGTGGAAGTCGCTCTTGTTCGGAAAGACAAAG10.17513134851138354No Hit
CTGTTTCTTATACACATCTCCGAGCCCACGAGACGATGCACAATCTCGTA10.17513134851138354No Hit
GTCATTGTCACTGGTCAGCTCCGAGCCCACGAGACCAAGCGATATCTCGT10.17513134851138354No Hit
CAAGCAATCAAGGCTTCTCTTATACACATCTCCGAGCCCACGAGACGATG10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACGTGCATTCATCTCGTATGCCG10.17513134851138354No Hit
CTTCAGTGGAACATTCAGTTGTCTGTCCCTTATACACATCTCCGAGCTCA10.17513134851138354No Hit
GTAGTGCTGCTCGTCCAGGTAGCAGGCCACCACAATGCTGGCGGGGACCG10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACCCCCGTACATCTCGTATGGCG10.17513134851138354No Hit
AAACTCCCTGACCAATCTGTCTCTTATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACCAAGCGATATCTCGTATGCCG10.17513134851138354No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGACATACTCATTT10.17513134851138354No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTGGC10.17513134851138354No Hit
CTGTTTTCATCCCACAGGTTGTTATTTTGTACTTTGAGCCAATCACATTT10.17513134851138354No Hit
GTCCAGGGCGGGCATGGATTGCAGGGCCGCGGGCAAGGGGGTCACTGCGT10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACCCACGTATACCTCGTATGCCG10.17513134851138354No Hit
CAACCAAAAGAACAGCCTGTCTCTCATACACATCTCCGAGCCCACGAGAC10.17513134851138354No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCT10.17513134851138354No Hit
GCACAGGTCGTATACACATTGGCGGAAGTACTCAGAGGGACTCAGCACCG10.17513134851138354No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGTG10.17513134851138354No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGTGGGGACCG10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACAACCAACGACCTCGTATGCCG10.17513134851138354No Hit
GTAAAAGTTGAAATGTCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGC10.17513134851138354No Hit
GTATGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGT10.17513134851138354No Hit
TTTCAGGTCAGAGCCCACGAGACAACCAACGATCTCGTATGCCGTCTTCT10.17513134851138354RNA PCR Primer, Index 36 (96% over 25bp)
CCTGACTCACGTTTCCGAGCCCACGAGACCAATCCTCATCTCGTATGCCG10.17513134851138354No Hit
TTTCAGGTAGGTGGACCTGTCTCTTATACACATCTCCGAGCCCACGAGAT10.17513134851138354No Hit
TAAAATAGTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGC10.17513134851138354No Hit
ACACCAGCCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACG10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGGACGTGCATTCATCTCGTATGCCGT10.17513134851138354No Hit
CAAGCAATCAAGGCCAGTCTACACATCTCCGAGCCCACGAGACGATGCAC10.17513134851138354No Hit
CTTCAGTGGAACATTCAGTTGTCTGTCTCTTATACACATCTCCGAGCCCA10.17513134851138354No Hit
GTAAAAGTTGAAATGTCAGGGCCCACGAGACACAATTCAATCTCGTATGC10.17513134851138354No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATCACATCCCCGAGCTCACGAGACG10.17513134851138354No Hit
AACTGTAGCTTACACTAACTCCGAGCCCACGAGACCCACGTATATCTCGT10.17513134851138354No Hit
TCTCAGGTCGGATACGCATTCCCGGCGGCACTCGGCCGGACTGGGCTTCG10.17513134851138354No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCTTCC10.17513134851138354No Hit
CCTGACTCACGTTTCCGAGCCCACGAGCGATGCACAATCTCGTATGCCGT10.17513134851138354No Hit
CCTTTAACAAGTATGCCTGTCAGCATCACACTGGTGACCAGTCCTACGGC10.17513134851138354No Hit
TGGAATAAGTTCAGTCTCACAGCATTTTACTGGCACCGGGTCATTCTTTT10.17513134851138354No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGTGCCATTTGCACCCGC10.17513134851138354No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTACGAGCCCACGAGAC10.17513134851138354No Hit
CTTTGACAGCTCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTT10.17513134851138354No Hit

[FAIL]Adapter Content

Adapter graph