FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66652
Sequences flagged as poor quality0
Sequence length150
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC4854272.82902238492468No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCG64579.687631278881353No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAG9401.410310268259017No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAG8761.3142891436115947No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC7051.0577327011942628No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGC6210.9317049750945208No Hit
GGTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTG5500.8251815399387865No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGT4160.6241373102082458No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACAT3280.49210826381803996No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCCCCACGTTGC2570.3855848286623057No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTT2420.3630798775730661No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC1950.2925643641601152No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGT1750.26255776270779574No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGTGTCTCCACGTTGC1730.25955710256256376No Hit
GTCATTGTCACTGGTCAGCTCCAACACCTTCTGCTGCGTCTCCACGTTGC1160.17403828842345317No Hit
GTCATTATCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC960.14403168697113364No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAG920.13803036668066976No Hit
TTTCAGGTAGGTGGACCTGTCTCTTATACACATCTCCGAGCCCACGAGAC860.1290283862449739No Hit
ATCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC800.12002640580927805No Hit
GTCATTGTCACTAGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC760.11402508551881414No Hit
TCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG750.11252475544619815No Hit
GTCATTGTCACTGGTCAGCCCCAGCACCTTCTGCTGCGTCTCCACGTTGC730.10952409530096623No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTTTGCTGCGTCTCCACGTTGC720.10802376522835024No Hit
GTCATTGTCATGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCG710.10652343515573427No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGTTGCGTCTCCACGTTGC710.10652343515573427No Hit
GTCATTGTCACTGTTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC670.10052211486527035No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)