FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences135
Sequences flagged as poor quality0
Sequence length75
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG6346.666666666666664No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT42.9629629629629632No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATATCTCGTATGCCGTCTT32.2222222222222223No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT32.2222222222222223No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC32.2222222222222223No Hit
GCACAGGTCGTATCCGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG21.4814814814814816No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC21.4814814814814816No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGNGAAGGGGCCCTG21.4814814814814816No Hit
GCCCAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG21.4814814814814816No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCAGAGACCCACGTATATCTCGTATGCCGTCTTC10.7407407407407408Illumina PCR Primer Index 6 (95% over 21bp)
GCACAGGTCGTATACGCGTTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGACCTG10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGTGACTCAGCACCGCCTGGCAGGTCGCGAAGTGGCCCTG10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCACTG10.7407407407407408No Hit
TCTCGTGCTCGAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCCG10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGGACTCAGAGTGACTCAGCACCGCCTGGCAGGTCACGAAGGGGCCCTG10.7407407407407408No Hit
GCACAGGTCGTATACGCCTTGGCGGAAGTACTCAGAGTGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
GCACAGGTCGTATAGCATTGGCGGAAGTACGCAGAGGGACTCAGCACCGCATGGCAGGTCGCGAAGGGGCCGTGG10.7407407407407408No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATATATCGTATGCCGTCTT10.7407407407407408No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATATCTCGTATGCCGTCTTCT10.7407407407407408Illumina PCR Primer Index 6 (95% over 22bp)
CCTTTCACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACGCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC10.7407407407407408No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACCTCTCCGAGCCCACGAGACCCGCGTATAGCTCGTATGGCGGCTT10.7407407407407408No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACGTCTCCGAGACCACGAGACCCACGGATAACTCGGATGCCGTCTTCT10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGTGGCCCTG10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTGAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGTGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATATCTCGTATGCCGTCTC10.7407407407407408No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.7407407407407408No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGAGCGGCAGGTGTGGCGGGAGGCTGCGCGGGGCCCGCGCCAC10.7407407407407408No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGTCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGACCGCGCCCC10.7407407407407408No Hit
GCACCGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
GCAAAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGAATCAGCACCGCCTGGCAGGTCGCGAAGGAGACCGG10.7407407407407408No Hit
GCACAGGTCGTATACGCAGTGGCGGAAGTGCTCAGAGGGACTCAGCACCGCCTGGCAAGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
CCCCCAACAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATATCTCGTATGCCGTCTT10.7407407407407408No Hit
GCACAAGTCGTATACGCATTGGCGGAGGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGCGACACACGTATAACTCTTATGCCGTCTT10.7407407407407408No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATATCTAGTATGCCGTCTT10.7407407407407408No Hit
TCTCGTGCTCGCAGATGACGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCGGCGCGGGGCCCGCGCCCC10.7407407407407408No Hit
GCACAAGTCGTATACGCATTGGCGGAAGTAGTGAGAGGGACTAAGCACCGCCTGGCAGGGAGNGAAGGGGACCTG10.7407407407407408No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGTCAGGTTGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC10.7407407407407408No Hit
GCCCAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTGAGCACCGCCTGGCAGGTCGCGAAGGGGCCATG10.7407407407407408No Hit
GCACAGGTCGTATACGCAGTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
CCCCCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATATCTCGTATGCCGTCTT10.7407407407407408No Hit
GCACAGGTTGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGACCTG10.7407407407407408No Hit
GACACTTGGCCTGGCGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.7407407407407408No Hit
GGCAGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGCGGGCCTCAGCACCCCCTGGCAGGTCTCGAATGGGCCCTG10.7407407407407408No Hit
GCACAGGTCGTATACGCATCGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCTTG10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGGACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
GCACAGGTCGGATACGCAGTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGCAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATAGCTCGTATGCGGTCTT10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGACTGGCAGGTCGCGAAGGGGCCCTG10.7407407407407408No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT10.7407407407407408No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGATCGCGAAGGGGCCCTG10.7407407407407408No Hit
CAACCAAAAGACCAGCCTGTCTCTTATACACATCTCCGAGCCCACGCGACCCACGTATATCTCGTATACCGTCTT10.7407407407407408No Hit
GCACAGGTCGGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCT10.7407407407407408No Hit
CCTTTAACAAGTATGCCTATCAACACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT10.7407407407407408No Hit

[WARN]Adapter Content

Adapter graph