FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295413

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295413
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72
Sequences flagged as poor quality0
Sequence length75
%GC62

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG811.11111111111111No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG45.555555555555555No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC45.555555555555555No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA34.166666666666666No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC34.166666666666666No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT34.166666666666666No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC34.166666666666666No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC22.7777777777777777No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT22.7777777777777777No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA22.7777777777777777No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT22.7777777777777777No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT22.7777777777777777No Hit
ATAGCAAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTCCCCCTGCACCAGGGGAAGCAGTGGC11.3888888888888888No Hit
CAAGCAATCCAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.3888888888888888No Hit
CAGTGACATGTATTCCCCCTCTTACCTTACGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT11.3888888888888888No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGAACTCAGCACCGCCTGGCAGATCGCGAATGAGCCCTA11.3888888888888888No Hit
CCACAGGTCGTATACGCATTGGCGGAAGTACTCAGACGGACTCAGCACCGCCTGGCAGGTCGCGTAGGCCCCCTG11.3888888888888888No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGTCGAT11.3888888888888888No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTCGG11.3888888888888888No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCATGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC11.3888888888888888No Hit
GCCCAGGTCGTATACGCGTTGGCGGAAGTACTCATAGTGACTCAGCACCGCCTAGCCGGTCGCGAAGGAGCCCTG11.3888888888888888No Hit
CTTTGACAGCATCACGAGTTTCACCGGGAGCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG11.3888888888888888No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCGTTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC11.3888888888888888No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG11.3888888888888888No Hit
CTTCTTGTTTTCGGGACNTGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC11.3888888888888888No Hit
GACACTTGGCCTGGAGTACGGTGATGGAGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA11.3888888888888888No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCTGTTCCCGCGCCCC11.3888888888888888No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGAGTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG11.3888888888888888No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGC11.3888888888888888No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCTGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC11.3888888888888888No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTTCGGGGGGCCCCCTCAGTGA11.3888888888888888No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGATCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCGGCGCACGTG11.3888888888888888No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.3888888888888888No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGTGCCCGCGCCCC11.3888888888888888No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGGCCTGCTTGGGGGAGGGTGGGGGGAG11.3888888888888888No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCGGAGGGACTCAGTACCGCCTGGCAGGTCGCGAAGGGGCCCTG11.3888888888888888No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG11.3888888888888888No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGTGCCCTG11.3888888888888888No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTCGCCCTCTGTGGATTTGCTAATTTCAGCTTCATTGGGACCATG11.3888888888888888No Hit
TCTCGTGCCCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCTGGAGGCTGCGCGGGGCCCGCGCCCC11.3888888888888888No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGGGGGGGGCCCCCTCAGTGA11.3888888888888888No Hit
GTCCAGGGTGGGCATGGCTTGCAGTGCCGCGGGCACGCCGGGCACAGCGTCCTGCTGGGGGAGGGGTAGGGGGAT11.3888888888888888No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGGGAAGGGGCCCTG11.3888888888888888No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAACACCGCCTGGCAGGTCGCGAAGGGGCCCTG11.3888888888888888No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCCCAGCAATAAGCTGGAGTACCGCATTGACTACCTGA11.3888888888888888No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCAGCGCCCC11.3888888888888888No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)