FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187
Sequences flagged as poor quality0
Sequence length75
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG2111.229946524064172No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC136.951871657754011No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT105.347593582887701No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT84.27807486631016No Hit
GTTTCCAGGTCAAGGGTAACGGAACGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA84.27807486631016No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA84.27807486631016No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG63.2085561497326207No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA52.6737967914438503No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG42.13903743315508No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA42.13903743315508No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT42.13903743315508No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA42.13903743315508No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG42.13903743315508No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC42.13903743315508No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTAGCTCTGTCCACTCTTAACGGCCCC21.06951871657754No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA21.06951871657754No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT21.06951871657754No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC21.06951871657754No Hit
GCCACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGGAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.53475935828877No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCGCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT10.53475935828877No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCCCTGTCGCTCTGTCCACTCTTCACGGCCCC10.53475935828877No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCCCCGCCTGGCAGGTCGCGAAGGAGCCCTG10.53475935828877No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTGTCAACAACTACTGGT10.53475935828877No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGATGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.53475935828877No Hit
TAAAATAGTAGCCCTCCCGCACTCACCATGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.53475935828877No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCAGACTCATGTTCAGCAAACACTCGGAAGAAGTAGG10.53475935828877No Hit
ACATCAACCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCACTAAGCTGTAGGACCGCATTGACTACCTGA10.53475935828877No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTAATCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGAGGCCCTG10.53475935828877No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCGGTCCACTCTTAACGGCCCC10.53475935828877No Hit
GTTTCCAGGTCAAGGGTAACGGAACGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGTGCCCCCTCAGTGA10.53475935828877No Hit
GTAAAAGTTGAAATGTCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGAGGATGGGTAGGGGGATCAGGT10.53475935828877No Hit
GCACAGGTCGTATGCGCATTGGCGGACGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAGGGGGCCCTG10.53475935828877No Hit
GTAGTGCTGCTCGTACAGTTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTCGAGCAGCGTGAAGATGCCGAT10.53475935828877No Hit
TTTCCGGTCAGAGCTGAATTCCTCACGACGTTTTCGCTCTGTGGATTTGCCAGTTTCAGCTCCATTGGGGTCATG10.53475935828877No Hit
AACTGTAGCTTACACTGACTCCGTGGAACCGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT10.53475935828877No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTATT10.53475935828877No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTTCCCCTGCGCACATG10.53475935828877No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTACTGCTTGAGGATGGGTAGGGGGCT10.53475935828877No Hit
GTAGTGCTGCCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGA10.53475935828877No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCAAAGCATCATCCAT10.53475935828877No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCTTGTAGAGCAGCGTGAAGATGCCGAT10.53475935828877No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGTGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.53475935828877No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCGGTGCACCACTTCTGCCCCTGCGCACATG10.53475935828877No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.53475935828877No Hit
CCTTTAACCAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTTTT10.53475935828877No Hit
GTTTCCAGTTCAAGGGTAACGGAACGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.53475935828877No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCACTTTCAGCTCCATTGGGATCATG10.53475935828877No Hit
GCACAGGTCGTATACGCAGTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCGG10.53475935828877No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTCGCCGGCAA10.53475935828877No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATCAGCAGCACTCTGCACAGCCTCATCCAT10.53475935828877No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCNTTGACTACCTGA10.53475935828877No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGCGGACCGCATTGACTACATGA10.53475935828877No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGTACCGCATTGACTACCTGA10.53475935828877No Hit
TGAATGAGGTCAAGAGGATCTGGTGAGCCCTGGCAGAGAGGACTTATATAACAGTTGCTTTGTTGACAACAGTCA10.53475935828877No Hit
GTTTCCAGGTCAAGGGTAACGGAACGTGGACCAAGTCCCGCGTCTCATCCCGGGTGCGGGGGGCCCCCTCAGTGA10.53475935828877No Hit
GTTTCCAGGTCAAGGGTAACGGAACGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGAGGCCCCCTCAGTGA10.53475935828877No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGAGACCGTGTAGAGCAGCGTGAAGATGCCGAT10.53475935828877No Hit
GTTTCTAGGTCAAGGGTAACGGAACGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.53475935828877No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTTTCCACTCTTAACGGCCCC10.53475935828877No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCCATTTCAGCTCCATTGGGATCATG10.53475935828877No Hit
GCACAGGTCGTATACGCATTGGCGGAGGTGCTCAGGGGGACTCAGCACCGCCTGGCCGGTCGCGAATGGACCCTG10.53475935828877No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTCGG10.53475935828877No Hit
TCTCGTGCTCGCAGATGCCACCCAGCGGCTCAGGGGCGGCAGGTGGGGCGGGAGGCTGCGAGGGGCAAGCGCCCC10.53475935828877No Hit
CTTCTTGTTTTCGGGACATGCTTCAGACCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC10.53475935828877No Hit
GCACAAGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCGG10.53475935828877No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGACAGGTCGCGAAGGGGCCCTG10.53475935828877No Hit
CAGTGAATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTATCTTCTTTTTTCTTCCTGGCAGTATTATT10.53475935828877No Hit
GTTTCCAGGTCAAGGGTAACGGAACGTAGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.53475935828877No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACCCTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTTTT10.53475935828877No Hit
GTAGTGCTGCTCGTACAGTTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT10.53475935828877No Hit
GTTTCCAGGTCAAGGGTAACGGAACGTGGACCAAGTCCCGCGTCTCCTCCCGGGTTCGGGGGGCCCCCTCAGTGA10.53475935828877No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCGG10.53475935828877No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACAATGGTGGCCACTTCTAGAATCAGCACCCTTTCAACAACTCCTGTT10.53475935828877No Hit
TCGCGTGCTCGCAGATGCCGCCCAGCGGCTGGGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCACC10.53475935828877No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCACACACTCGGAAGAAGTAGG10.53475935828877No Hit
CAGTGACATGTATTCACCCTCTTACCTTAAGGCTGTGATTCTTTATCTCTTCTTTTTTCTTCCTGGCAGAATTAT10.53475935828877No Hit
GTTTCCAGGTCAAGGGTAACGTAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGATGCCCCCTCAGTGA10.53475935828877No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAAGCAGCACCCGTTCAACAACTCCTGTT10.53475935828877No Hit
CTTTGACAGCATCACGAGTTTCGCCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG10.53475935828877No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACACCTCCTGTT10.53475935828877No Hit
GTAATGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT10.53475935828877No Hit
TTTCAGGTCAGAGCTGACGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG10.53475935828877No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGGGGATGGGTAGGGGGAT10.53475935828877No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCCGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.53475935828877No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTCGATTTGCCAATTTCACCTCCCTTGGCCTCATC10.53475935828877No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGTACCGCATTGACTACCTGA10.53475935828877No Hit
CTTCTTGTTTTCGTGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC10.53475935828877No Hit
CCTTTAACAAGGATGCCTGTCAGCACCACACTGGTGTCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT10.53475935828877No Hit
CTTTGACATCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCACACACTCGGAAGAAGTAGG10.53475935828877No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAACAGCGGGTAGCCGGCAA10.53475935828877No Hit
CCTTTAACAAGTATGCCTGTCAACACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT10.53475935828877No Hit
ACCTCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACAGCATTGACTACCTGA10.53475935828877No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTACCAATTTCAGCTCCATTGGGATCATG10.53475935828877No Hit
ACATCAGCCTCTTTCTTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA10.53475935828877No Hit

[OK]Adapter Content

Adapter graph