FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences163
Sequences flagged as poor quality0
Sequence length75
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG106.134969325153374No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT63.6809815950920246No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT63.6809815950920246No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT63.6809815950920246No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA63.6809815950920246No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA53.067484662576687No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA53.067484662576687No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC42.4539877300613497No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAACCACTGCTGCAGAACTTGATAGCCACACC42.4539877300613497No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATA42.4539877300613497No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT42.4539877300613497No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG42.4539877300613497No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAAACCACTGCTGCAGAACTTGATAGCCACAC42.4539877300613497No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT31.8404907975460123No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTTTCAGAATGGCCGGGATGCTGGTGGC31.8404907975460123No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG31.8404907975460123No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT31.8404907975460123No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT31.8404907975460123No Hit
TGAATGAGGTCAAGAGGATCTGGTGAGCCCTGGCAGAGAGGACTTATATAACAGTTGCTTTGTTGACAACAGTCA21.2269938650306749No Hit
TGGAATAAGTTCAGTCTCACAGCATTTTACTGACACCGGGTCATTCTTTTTAATATGTGCTTTAGACTCTCCACT21.2269938650306749No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC21.2269938650306749No Hit
CCTTTAACAAGTATGCCTGTCAGCATCACACCGGTGACCAGTCCTGAGGCTAGCACCCTTTCAACAACTCCTGTT21.2269938650306749No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCGTGCCGCTCCCCATGCACCAGGGGAAGCAGTGG10.6134969325153374No Hit
AGCCAAAGGGTCTAAAGAAGTGGAAGTGACTCTTGTTCGGAAAGACAAAGGGAGCCAGAAAACAACCCGATCACG10.6134969325153374No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGAGGATGGGTAGGGGGAT10.6134969325153374No Hit
GCACAGGTCGTATACGCATTGGAGGAATTAATCAGGTGGACTCAGCACCGCCTGGCGTGTCGCGAAGGGTCACGG10.6134969325153374No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTCGAGCAGCGTGAAGATGCCGAT10.6134969325153374No Hit
GTAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCCCCACTTCTGCCCCTGCGCACAT10.6134969325153374No Hit
AGCCAAAGGGTCTAAAGAAGTGGAAGTCGCTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACG10.6134969325153374No Hit
TAAAATAGTAGCACTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.6134969325153374No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTGGCCACCTTCCCATAAGCAACACTCTGCACAGCATCATCCAT10.6134969325153374No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATACGCAGCACTCTGCACAGCATCATCCAT10.6134969325153374No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGTAAGCTCAGGAGTAGAAAAAACGGAGTGTTGCCATTCAGTTA10.6134969325153374No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGCGACTAACGTCTGTGTTGTTATCAGCCAAGC10.6134969325153374No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT10.6134969325153374No Hit
GGCTTTGGTGTGAGTCCGTGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCTGCCGTCCAGCACGGCCC10.6134969325153374No Hit
TAAATAGTCGCCCTCCCGCACTCACCAGGTCCGGTCGTTAGTACCTGTTCACCACTTCTGCCCCTGCACACATGA10.6134969325153374No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAGGTGGCCCTG10.6134969325153374No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA10.6134969325153374No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTNGGAAGAAGTAGG10.6134969325153374No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGTGCACTG10.6134969325153374No Hit
ACCTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT10.6134969325153374No Hit
CAAGCAATCAAGGCCAGGCTACCCTGCAGCCCTTGCCACCTGCCAATAAGCAGCACTCTGCACAGCATAATCCAA10.6134969325153374No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCGGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.6134969325153374No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC10.6134969325153374No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTCCCCCTGCACCAGGGGACGCAGTGG10.6134969325153374No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTCCCCCTGCACCAGGGGAAGCAGTGG10.6134969325153374No Hit
CCTGACTCACGGTTCCTTATTGCTGGGATGTTCACAGAGCCAACGTCATGGAAGGCGGGGACCCAACCTTCCCAC10.6134969325153374No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCGGCGGGTAGCCGGCAA10.6134969325153374No Hit
CCTGACTCACGTTTCCTTATTGCTGGGATGTTCACAGAGCCAACGTCCTGGAAGGCGGGGACCCAACCTTCCCAC10.6134969325153374No Hit
GCCACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.6134969325153374No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTTGCATGTGCCAATA10.6134969325153374No Hit
AGCCAAAGGGTCTAAAGAAGTGGAAGTCGCTCTTGAGCGGAAAGACAAAGGGCGCCAGAAAGCAACCCGATCACG10.6134969325153374No Hit
CAAGCAATCAAGGCCAGTATACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGGACAGCATCATCCAT10.6134969325153374No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTTGTGGCCACTTCTGCAATCAGCACCCTTTCAACACCTCCTGTT10.6134969325153374No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAACAAACGGAGTGGTGCCATTCAGGTA10.6134969325153374No Hit
GACACTTGGCCTGGAGTGCGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.6134969325153374No Hit
CTTTGACAGCTCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGGA10.6134969325153374No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGTCACCACAGCAATAAGCTGGAGGACCTCATTGACTACCTGA10.6134969325153374No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGTGCACATG10.6134969325153374No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCCCCAGCAGCGGGTAGCCGGCAA10.6134969325153374No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGAGGCCCTG10.6134969325153374No Hit
CAAGCAATCAAGGCCCGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTACACAGCATCATCCAT10.6134969325153374No Hit
TAAAATAGTCGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.6134969325153374No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCGGGCGGGGACCGAGTAGAGCAGCGTGAAGATGCCGAT10.6134969325153374No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACGACTTCTGCCCCTGCGCACATT10.6134969325153374No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATAAGCCAAGT10.6134969325153374No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCNACAACTCCTGTT10.6134969325153374No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGACGAAGTCGG10.6134969325153374No Hit
CTGTTTTCATCCCACAGGTTGTTATTTTGTACTTTGAGCCAAGCACATTTCGCTGTATTCTCCTAAGATGGGCTC10.6134969325153374No Hit
AAAGTCTCTGACGGGGATGAGTGTGGGAGTGGGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA10.6134969325153374No Hit
CTGTTTTCATCCCACAGGTTGTTATTTTGTACTTTGAGCCAAGCACATTTCGCTGTATTCTCCTAATATGTGCTC10.6134969325153374No Hit
TGGAATAAGTTCAGTCTCACAGCATTTTACTGGCACCGGGTCATTCTTTTTAATATGTGCTTNAGACTCTCCACT10.6134969325153374No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAACCACTGCTGCAGAACTTGATAGCCCCACC10.6134969325153374No Hit
GTCCAGGGTGGGCATGGATTGCAGGACCGCGGGCACGTGGGGCACTGCGTCCTGCTTGAGAATGGGTAGGGGGAT10.6134969325153374No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTGCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.6134969325153374No Hit
AGCCAAAGGGTCTAAAGCAGTTGAAGTCACTCTTGTTCGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACG10.6134969325153374No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGNGAAGATGCCGAT10.6134969325153374No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCTCATAAGCAGCACGCTGCACAGCATCATCCAT10.6134969325153374No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCACACACTCGGAAGAAGTAGG10.6134969325153374No Hit
AGCCAAAGGGTCTAAAGAAGTGGAAGTCGCTCTTGTTAGGAAAGACAAAGGGCGCCAGAAAACAACCCGATCACG10.6134969325153374No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACCTG10.6134969325153374No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA10.6134969325153374No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGAATCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCAG10.6134969325153374No Hit
CTGTTTTCATCCCACAGGTTGTTATTTTGTACTTTGAGCCAAGCACATTTCGCTGTATTCTCCTAAGATGGTCTC10.6134969325153374No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTAACAGTTTTGACTAGACAAACCACTGCTGCAGAACTTGATAGCCACACC10.6134969325153374No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTACCGCCCCC10.6134969325153374No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCACGCGCCCC10.6134969325153374No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGGGGATGGGTAGGGGGAT10.6134969325153374No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACATGTGCACCACTTATGCCCCTGCGCACATG10.6134969325153374No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGTCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT10.6134969325153374No Hit
TCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTTG10.6134969325153374No Hit
GCACAGATCGTATACGCATTGGCGGAAGTACTAAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.6134969325153374No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC10.6134969325153374No Hit

[OK]Adapter Content

Adapter graph