FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295635

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295635
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57
Sequences flagged as poor quality0
Sequence length75
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA712.280701754385964No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT58.771929824561402No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT35.263157894736842No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTTTCAGAATGGCCGGGATGCTGGTGGC35.263157894736842No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT23.508771929824561No Hit
GGTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCT11.7543859649122806No Hit
GTCATTGTCACTGATCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTTGCCTTGTCGCGGCTCTT11.7543859649122806No Hit
GTCATTGTCACTGTTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT11.7543859649122806No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCATCGGGTAGCCGGCAA11.7543859649122806No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCAGGGCACAAGCAGCGGGTAGCCGGCAA11.7543859649122806No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTATCCACGTTGCGCTGCTTGGCCTTGTCGCGTCTCTT11.7543859649122806No Hit
ACATAAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.7543859649122806No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCTTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT11.7543859649122806No Hit
GCACCGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGCCTCAGCACCGCCTGGCCGGTCGCGACGGGGCCCTG11.7543859649122806No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTAGCGGCTCTT11.7543859649122806No Hit
AACTGTAGCTGACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT11.7543859649122806No Hit
GTCATTGTCACTGGTCAGCTCCAGAACTTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT11.7543859649122806No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGTCCTTGTCGCGTCTCTT11.7543859649122806No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTCGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA11.7543859649122806No Hit
GGTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTTGCCTTGTCGCGGCTCT11.7543859649122806No Hit
AACTTTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGCGACGAACGTCTGTGTTTTTATCAGCCACGT11.7543859649122806No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATA11.7543859649122806No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACTAACGTCTTTGTTGTTATCAGCCAAGT11.7543859649122806No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTCACCGGCAA11.7543859649122806No Hit
GACACTTAGCCTGGAGTACGGTGATAGCGTTGAGGCTGTGGTAGGTCCGAGTCACCAGCAGCGGGTAGCCGTAAA11.7543859649122806No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.7543859649122806No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGATAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA11.7543859649122806No Hit
GTCATTGTCACTGGTCGGCTCCAGCACGTTCTGCTGCTTCTCCACGTTTCGCTACTTGGCCTTGTCGCGGCTCTT11.7543859649122806No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGCCGAACGTCTGTGTTGTTATCAGCCAAGT11.7543859649122806No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACTTTTCGCTACTTGGCCTTATCGCGGCTCTT11.7543859649122806No Hit
CCTGACTCACGTTTCCTTATTGCTGGGATGTTCACAGAGCCAACGTCCTGGAAGGCGGGGACCCAACCTTCCCAC11.7543859649122806No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGAGCCGGGGCACCAGCAGCGGGTAGGCGGCAA11.7543859649122806No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTAGCATTTGCCACTA11.7543859649122806No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCTCGGCTCTT11.7543859649122806No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCCCCAGCAGCAGATAGCCGGCAA11.7543859649122806No Hit
ACCTCCTCCTCTTTCTTCTCCTCCTTTCCAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.7543859649122806No Hit
AGCCAAAGGGTATAAAGAAGTGGAAGTCGCTCTTGTTCGGAAAGACAAAGGGCACCAGAAAACAAACCGATCACG11.7543859649122806No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTTTCGCGGCTCTT11.7543859649122806No Hit
GTCATTGTCGCTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT11.7543859649122806No Hit
AACGTTAGCTTACACTGACTCCGTGGAAAAGTTTCTGCCGAATGAGACGAACGTCTGTGTCGTTATCAGCCAAGT11.7543859649122806No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTCCCTCTGCACCAGGGGAAGCAGTGG11.7543859649122806No Hit
AACTGTAGCTTAAACTGACTCCGTGGAACAGTTTCTCCCCAAGGAGAAGAACGTATGGGTTGTTATCAGCCAAGT11.7543859649122806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)