FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115
Sequences flagged as poor quality0
Sequence length75
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG97.82608695652174No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA86.956521739130435No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT65.217391304347826No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG65.217391304347826No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG65.217391304347826No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT32.608695652173913No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA21.7391304347826086No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT21.7391304347826086No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA21.7391304347826086No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT21.7391304347826086No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTTTCAGAATGGCCGGGATGCTGGTGGC21.7391304347826086No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA21.7391304347826086No Hit
AACTGTAGCTTACACTGGCTCCGTGGAACAGTTTCTCCCCAATGAGACGAACATCTTTGTTGTTATCAGCCCAGT10.8695652173913043No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAGGCAGCACTCTGCACAGCATCATCCAT10.8695652173913043No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGAGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC10.8695652173913043No Hit
CCTTTAACAAGTTGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTTT10.8695652173913043No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGGCTGTGTTGTTATCAGCCAAGT10.8695652173913043No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGTCTCTT10.8695652173913043No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGACCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.8695652173913043No Hit
CAAGCAATCAAGTCCAGTCTACCCTGCCGCCCGTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.8695652173913043No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGTTCGGTAGTACCTGTGCACCACTTCTTCCCCTGCGCACATG10.8695652173913043No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGATCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.8695652173913043No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGAGCACCACTTCTGCCCCTGCGCACATG10.8695652173913043No Hit
TAAAATAGTAGCGCTCCCGCACTCACCAGGTCCTGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.8695652173913043No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGAATCAGCACCGCCTGGCCGGTCGCGAAGGGGCCCTG10.8695652173913043No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGTTCGTTAGTACCTGTGCACCACATCTGCNCCTGCGCACATG10.8695652173913043No Hit
TAAAATAGTAGCCCTCCCGCACTCACCATGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTTCTCCCCTT10.8695652173913043No Hit
CAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACGTCTGCCCCTGCGCACATG10.8695652173913043No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACACTTTCAACACCTCCTGTT10.8695652173913043No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT10.8695652173913043No Hit
AACTTTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT10.8695652173913043No Hit
AAAATCTCTGACGTGGATGAGTTTGGGATTGTGGAAGCTCAGGAGGAGAAAAAACGTAGTGGTGCCATTCAGATA10.8695652173913043No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC10.8695652173913043No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCAAT10.8695652173913043No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGTGGCACCAGCAGCGGGTAGCCGGCAA10.8695652173913043No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCACTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.8695652173913043No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCCTCATCCAT10.8695652173913043No Hit
GACACTTGGCCTGGAGTACGGGGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.8695652173913043No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGCCTACCTGA10.8695652173913043No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAACACTCTGCACAGCGTCATCCAT10.8695652173913043No Hit
AGCCAAAGGGTCTAAAGAAGTGGAAGTCGCTCTTGTTAGGAAAGACAAAGGGCGCCAGAAAACAAACCGATCACG10.8695652173913043No Hit
GTCCTTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGTCTCTT10.8695652173913043No Hit
CTTTGACAGCATCACGAGTTTCACCTGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG10.8695652173913043No Hit
CCTTAACAAGTATGCCTGTCAGCACCACACTTGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTTG10.8695652173913043No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAACAAACGGAGTGGTGCCATTCAGGTA10.8695652173913043No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAACCACTGCTGCAGAACTTGATAGCCACACC10.8695652173913043No Hit
CAGCAAACACGCGGAAGAAGTAGGATGTTGCCGGCGCCAAAGTAGGGACGCTGAAGCGTGTTTTGGAGCACTCAG10.8695652173913043No Hit
GACACTTGGCCTGGAGTACGGTGGTGGCGTTGAGGCTGTGGTAGTGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.8695652173913043No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTATTAACGGCCCC10.8695652173913043No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTCGAGGCTGTGGTAGGCCCGGGGCACCAGCAGCGGGTAGCCGTCAA10.8695652173913043No Hit
TAAAATAGTAGCCCTCACGCACTAACCAGGGCCGGTCGGTAGTACCTGTACACCACTTCTGCCCCTGCGCACATG10.8695652173913043No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT10.8695652173913043No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTTTCGCTCTGTCCACTCTTAACGGCCCC10.8695652173913043No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGTATCATG10.8695652173913043No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGACAGGTCGCGAAGGGGCCCTG10.8695652173913043No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT10.8695652173913043No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGTTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTTTT10.8695652173913043No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC10.8695652173913043No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC10.8695652173913043No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATA10.8695652173913043No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGNGAAGGGGCCCTG10.8695652173913043No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCACACACTCGGAAGAAGTAGG10.8695652173913043No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGTCACCAGCAGCGGGTAGCCGTCAA10.8695652173913043No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCGCCACTTCGGCCCCTGCGCACATG10.8695652173913043No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCACTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.8695652173913043No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGGTATCAGCCAAGT10.8695652173913043No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCGCTTGGCCTTGTCGCGGCTCTTG10.8695652173913043No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTGCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.8695652173913043No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGNTATCAGCCAAGT10.8695652173913043No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGACAAGC10.8695652173913043No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGTTCGGTCGTACCTGTTCACCACTTCTGCCCCTGCGCACATG10.8695652173913043No Hit
CAAGCAATCAAAGCCAGTCTACCCTGCAGCCATTGCCGCCTGCCCATAAGCAGCACTCTGCACAGCATCATACAT10.8695652173913043No Hit
TAAAATAGTAGCCATCCCGCACTCACCAGGTCCGGTCGGTAGTACATGTGCACCACTTCTGCCACTGCGCACATG10.8695652173913043No Hit
GCACAGGTCGTATACGCATTGGAGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.8695652173913043No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAACGGGTAGCCGGCAA10.8695652173913043No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGTTA10.8695652173913043No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGCGACGAACTTCTGTTTTGTTATCAGCCAAGT10.8695652173913043No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)