FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295637

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295637
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79
Sequences flagged as poor quality0
Sequence length75
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA78.860759493670885No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG78.860759493670885No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT56.329113924050633No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT45.063291139240507No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT33.79746835443038No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA22.5316455696202533No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG22.5316455696202533No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT22.5316455696202533No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC22.5316455696202533No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG22.5316455696202533No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCATGGCAGGTCGCGAAGGGGCCCTG11.2658227848101267No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGAGGATGGGTAGGGGGAT11.2658227848101267No Hit
AACTGTAGCTTGCACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGGGTTATTATCAGCCAAGC11.2658227848101267No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCAGGGGCACCAGCAGCGGGTAGCCGGCAA11.2658227848101267No Hit
CAAGCAATCAAGGCCAGTCTACGCTGCAGACCTTGCCACCTTCCCATAAGCAGCACGCTGCACAGCATCATCCAT11.2658227848101267No Hit
GACACTTGGCCTGGAGTACTGGGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA11.2658227848101267No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAACAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.2658227848101267No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAATTAGG11.2658227848101267No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTGTCAGCCAAGT11.2658227848101267No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCACCCTCAGTGA11.2658227848101267No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCACCCACTCGGCCGAATTAGG11.2658227848101267No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCATCACACTTTCAACAACTCCTGTT11.2658227848101267No Hit
GACACTTGGCCTGGAGTACGGTGATGGCATTGAGGCTGTGGTAGGGACGGGGCACCAGCAGCGGGTAGCCGGAAA11.2658227848101267No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGTTCCGGGGCACCAGCAGCGGGTAGCCGGCAA11.2658227848101267No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC11.2658227848101267No Hit
CAAGCAACAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCCTCATCCATC11.2658227848101267No Hit
CCTTTAACAAGTTTGCCTGTCAGCACCACACTGTTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT11.2658227848101267No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCAACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.2658227848101267No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.2658227848101267No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT11.2658227848101267No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGCT11.2658227848101267No Hit
GCATAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG11.2658227848101267No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCATCACTCTGCACAGCATCATCCAT11.2658227848101267No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCATCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCGTCCAT11.2658227848101267No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTTTCAGAATGGCCGGGATGCTGGTGGC11.2658227848101267No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGCAGGGGCCCTG11.2658227848101267No Hit
CTTTGCCATCATCCCGAGTTTCACCGGGATCACCAATTCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG11.2658227848101267No Hit
CAAGCAATCAAGGCCAGTCTACCCTTCAGCCCTTGCCGCCTTCCCATAATCAACACTCTGCACAGCATCATCCAT11.2658227848101267No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACCAAAGCCACCACAGCCATAAGCTGGAGTACCGCATTGCCTACCTGA11.2658227848101267No Hit
CAAGCAATAAAGACCAGTCTACCCTGCAGACCGTGGCACATTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.2658227848101267No Hit
TAAAATAGTAGCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATGG11.2658227848101267No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGGAAAAACGGAGTAGTGCCATTCAGGTA11.2658227848101267No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTAAGCAAACACTCGGCAGAAGTAGG11.2658227848101267No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCACTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.2658227848101267No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGTTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG11.2658227848101267No Hit
CTTCTTGTTTTCCGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC11.2658227848101267No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.2658227848101267No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.2658227848101267No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT11.2658227848101267No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGGGGATGGGTAGGGGGAT11.2658227848101267No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGCGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCTGCAA11.2658227848101267No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGGGCACCACTTCTGCCCCTGCGCACATG11.2658227848101267No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCAGGCAA11.2658227848101267No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)