FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295639

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295639
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74
Sequences flagged as poor quality0
Sequence length75
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG79.45945945945946No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG56.756756756756757No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT45.405405405405405No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT34.054054054054054No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA34.054054054054054No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT34.054054054054054No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG22.7027027027027026No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT22.7027027027027026No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT22.7027027027027026No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCACTG11.3513513513513513No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGAGTGAAGATGCCGAG11.3513513513513513No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCNGTTAGCCGTCAA11.3513513513513513No Hit
AAAGTCTCTGACGTGGATGCGTTTGGGAGTGTGGAAGCTCAGGAGGAGCAAAAACGTAGTGGTGCCATTCAGGTA11.3513513513513513No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTACTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC11.3513513513513513No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGACCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.3513513513513513No Hit
GTCATTGTCACTGTTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCGCTTGGCCTTGTCGCGGCTCTTG11.3513513513513513No Hit
CAAGCAATCAAGACCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCCT11.3513513513513513No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCACCTGGCAGGTCGCGAAGGGGCCCTG11.3513513513513513No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTTCCCCTGCGCACATG11.3513513513513513No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA11.3513513513513513No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAACCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC11.3513513513513513No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCCGCNGGTAGCCGGCAA11.3513513513513513No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACGGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACGCCTGTT11.3513513513513513No Hit
GACACTTGGCCTGGAGTACGGTGATGTCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA11.3513513513513513No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA11.3513513513513513No Hit
TAAAATAGTAGCCCTCCCGCACTCACCGGGTCCGGTCGGTAGTACCTGTGCACCACCTCTGCCCCTGCGCACATG11.3513513513513513No Hit
GTAACAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAAACCACTGCTGCAGAACTTGATAGCCACAC11.3513513513513513No Hit
CAAGCAATCAAGGCCAGGCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.3513513513513513No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGTCCGTGTAGAGCTGCGTGAAGATGCCGAT11.3513513513513513No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCGCCACTTCTGCCCCTGCGCACATG11.3513513513513513No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCNGGTAGCCGGCAA11.3513513513513513No Hit
CTTTGACAGCATCACGAATTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG11.3513513513513513No Hit
CAGTAACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT11.3513513513513513No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGCTTTGCCAATTTCAGCTCCATTGGGATCATG11.3513513513513513No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCTGGGCACCAGCAGCGGGTAGCCGGCAA11.3513513513513513No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG11.3513513513513513No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCTGCTCTT11.3513513513513513No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT11.3513513513513513No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC11.3513513513513513No Hit
GTAGTGCTGCTCGTACAGTTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT11.3513513513513513No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTTGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC11.3513513513513513No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCACACACTCGGAAGAAGTAGG11.3513513513513513No Hit
GTAGTACTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGAGTAGAGCAGCGTGAAGATGCCGAT11.3513513513513513No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT11.3513513513513513No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCCGTGCACCACTTCTGCCCCTGCGCACATG11.3513513513513513No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCCAACACTCGGAAGAAGTAGG11.3513513513513513No Hit
TAAAAGAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG11.3513513513513513No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGAATCATCCAT11.3513513513513513No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGGGGATGGGTAGGGGGAT11.3513513513513513No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCAAT11.3513513513513513No Hit
ACATCAGCCTCTTTATTCTCAGCATTGCCAAAAGCCACCACAGCAATACGCTGGAGGACCTCATTGACTACCTGA11.3513513513513513No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC11.3513513513513513No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)