FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110
Sequences flagged as poor quality0
Sequence length75
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG1110.0No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT109.090909090909092No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT98.181818181818182No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT65.454545454545454No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT32.727272727272727No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT32.727272727272727No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA32.727272727272727No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG32.727272727272727No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCACTTTCAGCTCCATTGGGATCATG21.8181818181818181No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCTCGGCTCTT21.8181818181818181No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC21.8181818181818181No Hit
AAAGCAATCAAGGCCAGTCAACCCTGCAGCACTAGCAACCATACCATAAGAAGCACACTGAACAGCATCATCCAT10.9090909090909091No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCAGTG10.9090909090909091No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGAGCGTGTAGAGCAGCGTGAAGATGCCGAT10.9090909090909091No Hit
GTAAAAGTTGAAATGTCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGAGGATGGGTAGGGGGATCAGGT10.9090909090909091No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG10.9090909090909091No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTACTGCTTGGGGATGGGTAGGGGGAT10.9090909090909091No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGCTATCAGCCAAGT10.9090909090909091No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCACTT10.9090909090909091No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATCTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC10.9090909090909091No Hit
CTTTGACAGCATCACGAGTGTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTNGGAAGAAGTAGG10.9090909090909091No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCACTCTGTCCACNCTTAACGGCCCC10.9090909090909091No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT10.9090909090909091No Hit
CAAGCAATCAAGGCCAGGCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.9090909090909091No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA10.9090909090909091No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACAAGCAGCGGGTAGCCGGCAA10.9090909090909091No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGACCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.9090909090909091No Hit
GTTTCCAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGTTCGCGAAGGGTCCC10.9090909090909091No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA10.9090909090909091No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTNGGAAGAAGTAGG10.9090909090909091No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.9090909090909091No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCATCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.9090909090909091No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC10.9090909090909091No Hit
TTTCAGGTCAGAGCTGACGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCNATTGGGATCATG10.9090909090909091No Hit
CAGTGACATGTATTCCCCCTCTTAGCTTAAGGCTGTGATTCTGTATCTCTTCTTTTTTCTTCNTGGCAGTATTAT10.9090909090909091No Hit
ATGCAGTCCTGGGCAGGAGGGAACTGAAAATGGGAGCCTTCAGCATGGAGCCCTCAGGAGGCTGGGGTTGTAGGG10.9090909090909091No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCTTGGCACCAGCAGCGGGTAGCCGGCAA10.9090909090909091No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCNGGTAGCCGGCAA10.9090909090909091No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTTGATTTGCCAATTTCAGCTCNCTTGGGATCATG10.9090909090909091No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTTTCAGAATGGCCGGGATGCTGGTGGC10.9090909090909091No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCGCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.9090909090909091No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCACTCTGTGGATTTGCCAATTTAAGCTCCATTGGGCTCATG10.9090909090909091No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTAAGAGGGACTCAGCACCGCCTGGCGGGTCGCGAAGGGGCCCTG10.9090909090909091No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTATCTCTTCTTTTTTCTTCCTGGCAGTATTAT10.9090909090909091No Hit
CTTTGACAGCATCACGATTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG10.9090909090909091No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAACCACTCGGAAGAAGTAGG10.9090909090909091No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAATTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.9090909090909091No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT10.9090909090909091No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGG10.9090909090909091No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCGTGCCACCTGCCCATAAGCAGAGCGATGCACAGCATCATCCAA10.9090909090909091No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.9090909090909091No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGACCGGGGCACCAGCAGCGAGTAGCCGTCAA10.9090909090909091No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACNCTTAACGGCCCC10.9090909090909091No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATA10.9090909090909091No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGNGAAGGGGCCCTG10.9090909090909091No Hit
CTTTTACATCATCACGAGTTTCACCGAGATCACCAATGCCATACTCCTTTTCAGCAACCACTCAGAAGAAGTCGG10.9090909090909091No Hit
GCACAGATCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.9090909090909091No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCAC10.9090909090909091No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.9090909090909091No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCGCGGGGGCGGGGGGCCCCCTCAGTGA10.9090909090909091No Hit
GCACAGGTCGTATACGCCTTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCGGGTCGCGAAGGGGCCCTG10.9090909090909091No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGGGGATGGGTAGGGGGAT10.9090909090909091No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCTGGTGCGTGGGGCCCCCTCAGTGA10.9090909090909091No Hit
CTTCTTGTTTTCGTGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC10.9090909090909091No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTGCCCAATGAGACGGACGTCTGTGTTGTTATCAGCCAAGT10.9090909090909091No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCNTTGACTACCTGA10.9090909090909091No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAATCAGCACTCTGCANATCATCATCCAT10.9090909090909091No Hit

[OK]Adapter Content

Adapter graph