FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002295837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG25.128205128205128No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA25.128205128205128No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA25.128205128205128No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT25.128205128205128No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT25.128205128205128No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG25.128205128205128No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGGACATCTGTGTTGTTATCAGCCAAGC12.564102564102564No Hit
ACATCAGCCGCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGG12.564102564102564No Hit
TAAAATAATAGACCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCCCCGCTTCTACCCCTGCGCACATG12.564102564102564No Hit
AACTGTAGCTTACACTGACTCCGTGGAACCGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGACACGT12.564102564102564No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATTCCATACTCATTTTCAGCAAACACTCGTAATAATTAGT12.564102564102564No Hit
AGCTGTAGCTTACGCTGACTCCGTGGAACAGGTTCTGCACAATGATACGAACGTCTGTGTTGATGTCAGCCACAT12.564102564102564No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT12.564102564102564No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAATTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA12.564102564102564No Hit
GTCATTGTCACTCGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT12.564102564102564No Hit
CATTTGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCGGGTCGCGAAGGGGCCCTGGGGGTTCCGGAGCTGC12.564102564102564No Hit
CTTTGACAGCATCACGAGTTTCACCAGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGACGAAGTAGG12.564102564102564No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC12.564102564102564No Hit
CCTTTAACAAGTATACCTGTCAGCATCACACCGGTGACCAGTCCTGAGGCTAGCACCCTTTCAACAACTCCTGTT12.564102564102564No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTTCCCCTGCGCACATG12.564102564102564No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATA12.564102564102564No Hit
CAGTGACATGNATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT12.564102564102564No Hit
AACTTTAGCTTACACTGCCTCCGTGGAACAGTTTCTACACCATGATACGAACATCTTTGTTGTTATCAGCCCAGA12.564102564102564No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT12.564102564102564No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG12.564102564102564No Hit
GTAAAAGTTGAAATGTCCGGGCCAGTCACAGTTTTGACTAGACAAAACCACTGCTGCAGAACTTGATAGCCACAC12.564102564102564No Hit
ATGCTCAGTTGTCTGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATA12.564102564102564No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT12.564102564102564No Hit
CTGTTTTCATCCCACAGGTTGTTATTTTGTACTTTGAGCCAAGCACATTTCGCTGTATTCTCNTAAGATGCGCTC12.564102564102564No Hit
CCTTTAACAAGTCTGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT12.564102564102564No Hit
TGAATGAGGTCAAGAGGATCTGGTGAGCCCTTGCAGAGAGGACTTCTATAACATTTGCTTTGTTGACAACAGTCA12.564102564102564No Hit
CAAGCAATCAAGTCCAGTCTACCCTGCAGCCCTTGCCGTCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT12.564102564102564No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTTTCGCGGCTCTT12.564102564102564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)