FastQCFastQC Report
Wed 31 Aug 2022
EGAF00002295839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002295839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length75
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT29.090909090909092No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG29.090909090909092No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA29.090909090909092No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC14.545454545454546No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAATTTCGCCACACTGAGACGAACGTCTGTGTTGTTCTGAGCGAAGT14.545454545454546No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCGCAGCATCCTCCAT14.545454545454546No Hit
CTTTGACAGCATCACGAATTTCCCCGGTATCACCAATGCCAGACTCATTTTCAGCAGACACTCGGAAGAGGTATG14.545454545454546No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA14.545454545454546No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGAGCCGGGGCACCAGCAGCNGGTAGCCGGCAA14.545454545454546No Hit
TAAAATAGTAGCCCTCCCCCACTCACCAGGTCCCTTCGGCACTACCTTTCCACCACTTCTCCCCCTGCGCACATT14.545454545454546No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG14.545454545454546No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT14.545454545454546No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT14.545454545454546No Hit
CAGTGACATTTATTCCCCCTCTTACCTTAAGCCTTTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT14.545454545454546No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT14.545454545454546No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCATCACTCTGCACAGCATCATCCAT14.545454545454546No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGTGCTGGGGCACCAGCAGCTGGTAGCTGGCAA14.545454545454546No Hit
GTTTCCAGGTCAAGGGTAACGGAGGGTGGACCAAGTCCCGCGTCGCCTCCCGGGGGCGGGGGNGCCCCTCAGTGA14.545454545454546No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)