FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length75
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACAAGTATCAACACAAAATAAATTATAAATAAAAAAAAAAACAAAAACTCAAAACAAAACAAACACAAAAAAAA13.225806451612903No Hit
GTCAGATAGGTGCTCGCGCTGGGGCTCAGGTCCCACTGCAGGCCGGTGCGGCCGGAGCTGCCGGTCTGCTGGGTG13.225806451612903No Hit
TCCCAGACCTGCAACCTCAGGGGCCCCCCTGTGGCCAGGAGCTGTCTCTTATACACATCTGACGCTGCCGACGAC13.225806451612903No Hit
ATGCTAGGGGTGGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCACCTTGATTCT13.225806451612903No Hit
GAGCGGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCCCATGTACTCTGCGTCTGTCTCTTATACACATCT13.225806451612903No Hit
GGCCATCACCATCTACTGCCAGGCATCGGAGGAGTTCCTGAACGGCAGGGCAGTATACAGCCCCAAGAGCCCCTC13.225806451612903No Hit
GCTTGGTTTTACTCTAGATTTCACTGTCGTCCCACCCCACTTCTTCCACCCCACTTCTTCCTTCACCAACATGCC13.225806451612903No Hit
CACAGTCTCTTTTCCTGGGTTCAGTCTTCTTCGAGTTAGATCCATTGAAGTCCATCCGAAGTAGGGGGGCCATGA13.225806451612903No Hit
GAACCGAGCCAATGAGTTTAAGCCTAAAACACATGAAATATGCCATAAAACCTGTCTCGTAAACAGATCAGCCCA13.225806451612903No Hit
CACCGACAATGGCTGCAAGTTGAAAGCGTGACATGGAGTGGGCGTTGAGACCTCTGTCTATTACGCCTCTGTGAC13.225806451612903No Hit
CCTGTGGCCTCCCGCTCATGAACAGTTTCAACCTGAAGGATATGGCCCCAGGGTTGGGCAGTGAGACGCGGCTGG13.225806451612903No Hit
CCTCTGTCTATCGGCCACCTCCACATTTACTCTGACTAGATACATGTCTCTTATAAACATCAGACGCTGCCGACG13.225806451612903No Hit
AAGCAGGGGTGGCGGCTGCTGCGGCGGTTGCGGCGGGAGCCCGCCGTGGCGCCGGACTTTGTGCCCTTCCTGCAG13.225806451612903No Hit
GTATAAACAAAGAATACATATATTATTTAAAATTTAAAAAATAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAA13.225806451612903No Hit
AATTAGAAGTATCTTCTTCATGTGGACCCCAGTGTCATAAGGGAACTCCACTGCCCACTTACGAAGAGGCCAAGC13.225806451612903No Hit
GGACAACATGGGGAAACCCATCTCTACTAAAAATACAAAAATTAGCCGAGTGTGGTGGTGCGTGCCTGTAATCCC13.225806451612903No Hit
CCTCCGGGGCCACGCGCAGCTCGTTGTAGAAGGTGTGGTGCCAGATCTTCTCCATGTCGTCCCAGTTGGTGACGA13.225806451612903No Hit
ATGCCATTCATTTTTACACAAAATCTCACCACAATTCCACACAGAGATAGTCTGGAACTTGTAAACCTCCCATGC13.225806451612903No Hit
GTGGGGGTGGGGGCGGGCCCGCCAAGGGGTGGCGGTAGGGTGGGGGGGTGGGTGGGGCGGCGGCCGGTTGGGGGG13.225806451612903No Hit
GTGTGCCTGGGGCCTGGGCTGGCTGGGCCAGGCAGGGCTTGGGACTCCGTTTCTTCTTTTTGTCATCCATTGGGC13.225806451612903No Hit
CTTCTGAAGATCCTCCAGCTCCTTCACCACTCGCATGCTCGCCATCATGTCGGGACCGAGTGTGTGGCACCCGTG13.225806451612903No Hit
GGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCGCTGGTAGA13.225806451612903No Hit
GCGAGAGGAGGCACCGGGGCAACTCCACTGGCATCATCGGTGAGATGTAGCGAAGACACCGAGGCCGCGGCAGCA13.225806451612903No Hit
CACAAAATCTCACCACAATTCACACAGAGATAGTCTGGAACCTGTCTCTTATACACATCTGACGCTGCCGACGAC13.225806451612903No Hit
CAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGATTTTGTGTCTGTCT13.225806451612903No Hit
GCCAGAAAGAGAGAGTAGCGCGAGCACAGCTAAGGCCACGGAGCGAGACATCTCGGCCCGAATGCTGTCAGCTTC13.225806451612903No Hit
GAGGTGCACTGGGGTGGTTCTGCCTTGCTGCTGGTACTGATAACTTCTTGCTTCAGTTCATCTACAATGATCTTT13.225806451612903No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13.225806451612903No Hit
GAGGGTACGCTTGCAAATGATCCCCCTGCCGCACCGCCAACACACACACACACACACACACACACACACACACAC13.225806451612903No Hit
CCTTGAATGTTCTCTTAAGAAAATGATGCTGGTCATCGCAGCTTCAGCATCTCCTGTTTTTTGATGCTTGGCTCC13.225806451612903No Hit
GCCTAAGCCTCTCCCTCCAGCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGAAATAAA13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)