FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296042

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296042
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119
Sequences flagged as poor quality0
Sequence length75
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCTGTCTCTTATACA21.680672268907563No Hit
CTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGG21.680672268907563TruSeq Adapter, Index 1 (96% over 29bp)
GTGGAGCCCCACCGCTTCACTGAACTCGCCAAATCAAACCTCCCATGAGTCAGACCCCTACCATCGCTCGGCAGC21.680672268907563No Hit
GTTAGAGCCTTCTCCCTATAGTGAGTCGTATTACTGCCCATGTACTCTGCGTTCTGTCTCTTATACACATCTCCG21.680672268907563Clontech Universal Primer Mix Short (95% over 21bp)
TAATGAAACCGATATCCTTCGCGTACTGACGGAAACACTGGCGGCACATATTGAGGCCATATTTCCGGATCAGAC10.8403361344537815No Hit
ATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGG10.8403361344537815TruSeq Adapter, Index 1 (96% over 29bp)
GCTCACTGTAGCCTCCACCTCTTGGGCTTAAGCAATCCTCTCACCTCAATCTCCTGAGTAGCTGGGACTATAGAT10.8403361344537815No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATAAAAAATTTTTTAGAGGAAAAAA10.8403361344537815No Hit
TTCCGCCACTTCTCAATCTCAGTCCGTTTGGCGGCGAGGGGCTGGTAGTAGTCTCTTTTCTGCTGGGCCACTGTC10.8403361344537815No Hit
GCTGGAGGTCGACCAGATGTCCGAAAGTGTCGCCCCCCCGGGTGCTCGGGGGCTGTGTGGTATACACATCTCCGG10.8403361344537815No Hit
GAGAAGGAACAGGGAGTGGCCAGGATGCTGAGCCTGCTGCTGCTGGCGCTGCCCGTCCTGGCGAGCCCGGCCCTG10.8403361344537815No Hit
GCCGGAGTCCGCGGCGGCGGAGGAGGCGCGCGGCGGAGGCGGCTGCGGCGAGCAAGGAGGCGGATGAGGAACAAT10.8403361344537815No Hit
CAATAAGCTCTGGGACAGACGAATGGGCGCCCTCCTCCTTCCTTCTGTTGGGCTGGAGTGAGTGGAGGAGGTGAC10.8403361344537815No Hit
GACAGGTCCAGGAGCTCAGGTCCTCGTTCAGGGCGATGTAATCCTTGCCGTCGTAGGCGAACTGGTTATGCCCGC10.8403361344537815No Hit
GGTTATAGCCCCGTATGAGAAATGCAGATTGTGGAACTAGGCGCGAATAGAGTAGGGCGGGACACGTGAAATCCT10.8403361344537815No Hit
CCCGTGTCACCTACTACTTGGACTGGATCCACCACTATGTCCCCAAAAAGCCGTGAGTCAGGCCTGGGTTGGCCA10.8403361344537815No Hit
GGCCAGCACCTGCGGCCTGGGCTTCCTGGAGTACATATCAGATTCCCGAGGCAGCTGCCAGCTGGCTGGTTCACC10.8403361344537815No Hit
GTATGTAAATTGGAAGTTAACTTATGCACGCTTAACTATCTTAACAAGCTTTGAGTGCAAGAGATTGAAGAGTTC10.8403361344537815No Hit
GGTACCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTCATCTATTATGATAGCGACCGGCCCTCAGGGATCCCTG10.8403361344537815No Hit
GGCCAGGGGTCCGGGTGATTCCAGAGCATCCACGCTCTGCGCTGAAGGCACTGAACCTGCCATCACTGTCACAGC10.8403361344537815No Hit
GAGAAAAAGGAGGGAATGGAAGAAAAGAGAGAAGGTTCAGGCTTCTACAGGGCCAGTGTAGCCAGCGAGGCCATC10.8403361344537815No Hit
ACCCAGGCCTGACTCACGGCTTTTTGGGGACATAGTGGTGGATCCAGTCCAAGTAGTAGGTGACACGGGTGTAGA10.8403361344537815No Hit
GAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA10.8403361344537815No Hit
GTGGTATCAACGCAGAGTACATGGGATGGATGCCAAACAGACATGCCCGTGTCGGGGAAATCTGGTGCATATTAA10.8403361344537815No Hit
TCGTTGCCCAGCTCCAGCTGCTCGTTGAGCCACGCCACCGTCTTGCTGATCGCCATTTCCGACGCGAAGGGCACG10.8403361344537815No Hit
GACCGGCAGCAGCTGGTCCTGGTAGTAGAGGTGCTGCTCCCGCAGTTGCACCCTGAGGGCGGCCAGATCCTTGAC10.8403361344537815No Hit
CCCCTGTCCTGAGGACCCTTCCCTATCCTGAGCCCCCTTCCCTGTCCTAAGCCTGACGCCTGCACCGGGCCCTCC10.8403361344537815No Hit
NTTGGGGGCTCCCCTGGAAACAGAGAGACTGCTTGTATAGTTCATAAATCTACTGCTGCACTGCCGCCCATGTAC10.8403361344537815No Hit
GCTTCAGAGGAAATGGCGGTGGGAGGCGCTCATCATTGTCCACATCGCCCCAGCCAGTGACCCAGCACGGCATCC10.8403361344537815No Hit
GCCTTCTCGTTAGGGCTCAGACTCGGGCTAGGTATGGGGGAGGGAAGGGAAACAGATGGCGACGGCGGGCGGCGC10.8403361344537815No Hit
CTTCAACAGTGCTTGGACGGAACCCGGCGCTCGTTCCCCACCCCGGCCGGCCGCCCATAGCCAGCCCTCCGTCAC10.8403361344537815No Hit
AGAAGAAGGAGATGGAGAAATTGTGCAGCTGGTAGACCGCCACCTCCATGGGGGTCTGATACATTTCGGTGTTCA10.8403361344537815No Hit
TTTAAGTAGTTGTATTAATCTCTATCTTTCAAAGAGAAAAAAACTTATCTGCGGTTTCCTCAAGCTCCGCCTGCC10.8403361344537815No Hit
ACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCCAAAAAAAAAAAACTGACA10.8403361344537815No Hit
GAGGTCCAGCACTCAGGAGGATTAGCGCCCACCACCAGCTATCTGGGCAGGGGAGGGCTGGAGGGCCCGGTGCAG10.8403361344537815No Hit
GCCCCTGCCCCAGGCCAGGCCCTGCAGCGAGTGGGCATCGTCGGGGGTCAGGAGGCCCCCAGGAGCAAGTGGCCC10.8403361344537815No Hit
GACTTAGAGACATAGTCCTCACTCAGGAACTGAAAGTTCTGTGAAGAATTTGACCTGAATGTGTTCCTGCCCCCC10.8403361344537815No Hit
GCTTTGCCCCCCCAGGCCCTGTGCCTCCCTCTACAGCCCTCAGGGAGCTCATTGAGGAGCTGGTCAACATCACCC10.8403361344537815No Hit
GGGATGCCGTGCTGGGTCACTGGCTGGGGCGATGTGGACAATGATGAGCGCCTCCCACCGCCATTTCCTCTGAAG10.8403361344537815No Hit
AACCTGGCCTCTTTGCGTGAGCTGGGTGAGACCCAGCGCCGACCATGCACCATCCAGGTGCCCGAGCCCATCCTC10.8403361344537815No Hit
GGGCGCTCCTCAGCCCTGGGGTCCTGGTGCGGACCGGGCACACCGTGCTGACCTGGGGAATCACGCTGGTGCTCT10.8403361344537815No Hit
GTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGC10.8403361344537815No Hit
CCCCACCCTCATTCCTTCTCATTTCAGTGGCGTTAGGAGGGCGAGGAGGGGGATAGTGGAGATAAGCTGTCTCTT10.8403361344537815No Hit
GATTCTCAGCCCTCGGTCAAAAGAATCTGTTCCAGAATTCCCCCTTTCCCCTCCAAAGAAGAAGGATCTCTGTCT10.8403361344537815No Hit
GTATTAATCTCTATCTTTCAAAGAGAAAAAAAACTTATCTGCGGTTTCCTCAAGCTCCGCCTGCCCCCTCAGCAG10.8403361344537815No Hit
CTGTTGCCCAGCCTGGTCTCGCACTCCTGAGCTTAAGTGATTTGCCTGCCTCGGCCTCTCAAAGTGTTAGGATTA10.8403361344537815No Hit
CTCATCTTGCTAGAATGAAAATTCCTGAGACCCTTGAAGAAGATCAGCAATTCATGCTAAAAAAGTGTCCTGCCC10.8403361344537815No Hit
AATCTGTACCAGCCCACCGGGGGACAGCTGCTGTTGGATGGGAAGCCCCTTCCCCAATATGAGCACCGCTACCTG10.8403361344537815No Hit
ATTGGTAGCCGCCAGCGACCGGCAGGTGGCGGTACTGCAACCCTGCCGCTTCGGCGGCAGCCTGGATCTCGGCCG10.8403361344537815No Hit
TCCATGCACTTTAATGAGGTCCAGCACTCAGGAGGATTAGCGCCCACCACCAGCTGCCTGGGCAGGGGAGGGCCG10.8403361344537815No Hit
GTTGCTGAGCAGTGTCTTGCGCTCTTCGTTTGTTTTTTCTATGAGAGTCTTTATCTGTTTCACCCCGTTGACAGC10.8403361344537815No Hit
TCTCACCACAATTCACACAGAGATAGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACTGTCTCTTAT10.8403361344537815No Hit
GTCCTAGGCAAGATCATGTACATTTTTGGGGGCTACGAGCAGCAGGCGGACTGTTTTTCCAATGACATTCACAAG10.8403361344537815No Hit
GCTGCAAAGTCCTGAGGGACACACCTTGTCTCTGCTCCGGGGCCAGGGCTGAGGGAGGGGTGAGTGTTCCTCTGA10.8403361344537815No Hit
TCGCCACCATTCCCGGCGTCGGCCCTATCGGCTCAACGTTGCTGAGCATGAAGGCGCCGCCGGCGGAGACCTTCG10.8403361344537815No Hit
CACAAAATCTCACCACAATTCACACAGAGATAGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCTG10.8403361344537815No Hit
CATCACTGCTGCCTTTGTATTGCTTTCGCATCAGCCCATTGATGAGTTGGCTCACATGATCATCAACTGTCTCTT10.8403361344537815No Hit
GTGCCTGGGTGAGGGAGCAAGCTTAAGAGGCAGAAGAGGCCCAGCCCTGTAGGCACTGGGTACTCCCTGCTACCA10.8403361344537815No Hit
TGGGTGCAGTGGCAGGAAGCAGGAACTGGAAGGGGAAGCTGTGCTCTCCAGCGGGCAGGCTCCCCTTGTCTGCCA10.8403361344537815No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCGTAGCGACTGTCT10.8403361344537815No Hit
GGACATAGTGGTGGATCCAGTCCAAGTAGTAGGTGACACGGGTGTAGATGCCAGGCCGGTTGGGCTGGGCACAGC10.8403361344537815No Hit
GTAGGAGTCGGGCCCGTGTCTCAGTGCCCGTGTGGCTGATCATGCTCTCACACTGTCTCTTATACACATCTCCGA10.8403361344537815No Hit
GTCTATGCCTTTTGCACTGCTTGTCTGTACTGTCCATGGGTCCACAAAATCCTCTTCGGCTTCTGTGGCATCTGG10.8403361344537815No Hit
TCTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGG10.8403361344537815RNA PCR Primer, Index 40 (96% over 30bp)
CCACAGTAGTACACGTCATCTGGTTGAAGTGCAAAATATTTGTACAAGTATGCTCCTCCTAGAATAACACCTGCA10.8403361344537815No Hit
TCTTGCAGGTGGCTCTTCCTCCACATCACGACTGGGGTCTCGAAGAGGACGGGGGTAGGAAATCCTCCAGGATCT10.8403361344537815No Hit
CCCACACACTAGTTACCTTGATGTCCTGGAAGAGAGCGCGGCCGCCACGCTGGTTTTGCATCTTCAGGAGACGCT10.8403361344537815No Hit
GCCTACAACTCCTGCTCCTCTGCTGACTCGGCTGGCCCAGCACATGAAGTGGCCATCTGTCTCGTCACTAGACTC10.8403361344537815No Hit
ACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGGGG10.8403361344537815RNA PCR Primer, Index 1 (96% over 29bp)
CAGCATGTCGTCACGGACGATGCGGACGTCGTCTCCCGTGTAGGCGCCAAGGTGGTATTTTGCTGTCTCTTATAC10.8403361344537815No Hit
CTTAGTAACCTATTGACTATATTTTTTAAGTAGTTGTATTAATCTCTATCTTTCAAAGAGAAAAAAACTTATCTG10.8403361344537815No Hit
CTCCAACAACAAAGAATTACCTGATTCAGTGTCAGAGTACTCAGGTTGAGAAACCTGGCCACAGAGAAAAATCTC10.8403361344537815No Hit
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCTCTCTGCTTCCAG10.8403361344537815No Hit
GTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAG10.8403361344537815No Hit
ATATCACTCAGTTCCTTCTGGAGGTCATCCTTCCAGCAGCCACTGGCTCCCTGCGGTATCTCTTCAGTCTCCGGA10.8403361344537815No Hit
CGCCCGAGGAGGAGGTAGAGGTTGAAGCCCTCGATGGCCATCCAGGTGAGGCAGCTGAGCAGCGCGTAGTGCAGG10.8403361344537815No Hit
GCCCATGCCAGTGCTCAGTTTGACGAGGAAGAAGCCCCAGCTCAGCCAGGCCGCGTAGGCCATGACAGGCAGCAG10.8403361344537815No Hit
GAGTACATGGGGAGGAGGCCGAAAGACAGCTGTCTCTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCT10.8403361344537815No Hit
GAGAAAAAGGAGGGAATGGAAGAAAAGAGAGAAGGTTCAGGCTTCTACAGCGCCAGTGTAGCCAGCGAGGCCATA10.8403361344537815No Hit
TTTGGGGGCTCCCCTGGAAACAGAGAGACTGCTTGTATAGTTCATAAATCTACTGCTGCACTGCCGCCCATGTAC10.8403361344537815No Hit
CCCATGAGGTGGAGGTTATAGTGAGCAGAGATGGTGCCATTGCACTCCAACTTGGACAACAGAATGAGACTCTGT10.8403361344537815No Hit
CTGTCGCCGTGTTCCGCTGCGCCCGCACCGCCTATGTCTCAGCTCTCGGAGAACCCATGATCGTCCAGCCAATCG10.8403361344537815No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTCTGTCTCTTATACACATCTCCGAGC10.8403361344537815No Hit
TGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGCTGTCTCTTATACACATCTCC10.8403361344537815No Hit
CAACTGGCAAGTTTACAGGCTGGTAACCTACATCTTTGTCTACGAGAATCCCATCTCCCTGCTCTGCGGCGCTAT10.8403361344537815No Hit
GTCTTCTGGCTGTCAGGAGGTTTGGCTCCAGCTTTTGCTTCAGGTGTCAGCCAGAATGTCATCTTTTTGCAGAAG10.8403361344537815No Hit
GTACTACATTGGTGATATCCATCCGAGTGACCTTAAACCTGAAAGTGGTAGCACTGTCTCTTATACACATCTCCG10.8403361344537815No Hit
GGTTACAGCTTCTCAGTGTCAACAGCCAGCAGAAAATAAGCTTTCCGATTTGTTGGCACCCATCTCAGAGCCTGT10.8403361344537815No Hit
CAAGTGTTCGGAAGTCTCTTCAATCCATGTTATTCTGATGACTCTTTGAAGAAAGAACTTGAACCTGTCTCTTAT10.8403361344537815No Hit
GATTGTAGTAGCCGCGCAGCGTCCGCAGGTTCACTCGGAAAATCTGTGCGGTGTCCCTGGCGCTCCGTGTCTCCC10.8403361344537815No Hit
GAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGAGCCCACG10.8403361344537815No Hit
GGCCAGGTGAGGTCCACCGGCCCCTGGCAGCACAGCCCAGGGCCTGCATGGGGGCACCGGGCTCCATGCCTCTGG10.8403361344537815No Hit
GCCCAGTGCAGGCGTCAGGCTTAGGACAGGGAAGGGGGCTCAGGATGGGGAAGGGTCCTCAGGACAGGGGAAGGG10.8403361344537815No Hit
CATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGGGGGGG10.8403361344537815TruSeq Adapter, Index 1 (96% over 29bp)
GTTCAGGGACTCTGGCGATAAAGCTGCCGGAGTCCGCGGCGGCGGAGGAGGCGCGCGGCGGAGGCGGCTGCGGCG10.8403361344537815No Hit
CCAACTGCCACCGGTCCTGCCCAGAAACTCCTTCTTCTCTGAGTTCCAGATGAATTTCTTCCAGCTGCCCTCCTC10.8403361344537815No Hit
TCAACGCAGAGTACATGGGGAATGTCTTCGTGGCGGGGGAGAGACGCTGTTGGTCCTGATAAAGTGTTTTTCTTG10.8403361344537815No Hit
CCTCAAAGGTGATTGTGCCAGGCTCTGCGCCTGCCCCACACCCTCCCTTACCCTCCTCCAGACCATTCAGGACAC10.8403361344537815No Hit
TAACTGTGGTGCTTGTGCTGATCCTTCTGTATTTTCACTCATCAGTTTTGAAATACCATCACCATTTCCAATAGA10.8403361344537815No Hit
GGTATCAACGCAGAGTACATGGGGATGAGGACGAAAGACACATGCTCGGTTCCTGTATCTTATAAACAACTACGC10.8403361344537815No Hit
ACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCTCCGAGC10.8403361344537815No Hit
ACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGATCCGAGCCTGTCTCTTATACACATCTCCGAGC10.8403361344537815No Hit
TTCCCAGCATTGCCACTGCTGTGTTAGTTTTCTCATCTGTAAATAACTGCCTACATCTCACAGGGCCTCTAATAG10.8403361344537815No Hit
CCCTGACAAGGAGGGGTCACAGAGGTGACAATGAGACTGGCATTTTATCTGCCCCAGGTCACATTGGGGCAGCTG10.8403361344537815No Hit
GTGTGGGGGGCAGTCGCCACCTGGGTAGGAAGCAGTGGTGTTTTGGACAGCAGGGGTTGGTCCTCCAGTGACCCA10.8403361344537815No Hit
GTATCAACGCAGAGTACATGGGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATG10.8403361344537815No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATTGAGTAATGATGGCCACACCTGTCT10.8403361344537815No Hit
GGTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCAAAAAACTGTCT10.8403361344537815No Hit
CACCTGCCAGGGCCACTTGCTCCTGGGGGCCTCCTGACCCCCGACGATACCCGCTTGCTGCAGGGCCTGGACTGG10.8403361344537815No Hit
GCATGTCAGTCAGGCCAGTTCCCTGCAGAGGGAATTCCCAGCATGACCTCATTCATCTGTGAGGACACAGAGCAG10.8403361344537815No Hit
ATACAGTACTGTTTCTGGACCCTTATAAAATCCTGTGCAATAGACACATACATGTCACATTTAGCTGTGCTCAGA10.8403361344537815No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACTGTCTCTTATACACATCTC10.8403361344537815No Hit
CTCCATGAAGAAGCTTCATCTCAACCTCCGTCATGTTTTAGAAACCTTTTATCTTTTCCTTCCCTGTCTCTTATA10.8403361344537815No Hit
TTCCTGTCCTAAGCCCCCTGCTCTCTTCTGAGCCCCTTCCCCTGTCCTGAGGCTGTCTCTTATACACATCTCCGA10.8403361344537815No Hit
ATCAACGCAGAGTACATGGGGGCTCCCGAGCACGGCGGCGGCGTCGTCTCCCGGCAGTGCAGCTGCCGCTACCGC10.8403361344537815No Hit

[FAIL]Adapter Content

Adapter graph