FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119
Sequences flagged as poor quality0
Sequence length75
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG65.042016806722689No Hit
AACGCAGAGTACATGGGCAGTAATACGACTCACTATAGGGAGAAGGCTCTAACCTGTCTCTTATACACATCTGAC21.680672268907563Clontech Universal Primer Mix Short (95% over 21bp)
GGTCTGCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACA21.680672268907563No Hit
CGACAAACCAGCGCATGAGCAAAGCCGTCTTGACGACGGGCTGCCGAGCGATGGTAGGGGTCTGACTCATGGGAG21.680672268907563No Hit
GGGTGAACCAGCCAGCTGGCAGCTGCCTCGGGAATCTGATATGTACTCCAGGAAGCCCAGGCCGCAGGTGCTGGC10.8403361344537815No Hit
GGTCTGGATCGACCTGGCAGGACTCCTCGTCTTCCTGCTGCCTGTCATGGCCTACGCGGCCTGGCTGAGCTGGGG10.8403361344537815No Hit
GGCCGGCGAGCGCGAACCAGACGATCAGGAAATAGTCGATGGGCTGGACGATCATGGGTTCTCCGAGAGCTGAGA10.8403361344537815No Hit
CTCAGGTCATCCTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCACCCTCTGCACTGTCTCTTATACACATCTGA10.8403361344537815No Hit
GCGAAGATCACGGTGAAGAAGCAGTGGCGGACGGTGCCCACGGTTCTCTCGAAATTGCCAGCAAAGCGCCAGATG10.8403361344537815No Hit
GCCCCCGAGGGTGCGGTGAAGAGGTGACGGAGGGCTGGCTATGGGCGGCCGGCCGGGGTGGGGAACGAGCGCCGG10.8403361344537815No Hit
GAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTT10.8403361344537815No Hit
GTCTCAGACAATGAGCTCCAGGAAATGTCCAATCAGGGAAGTAAGTACGTCAATAAGGAAATTCAAAATGCTGTC10.8403361344537815No Hit
CCTGGGGGGCAGGAACACATTCAGGTCAAATTCTTCACAGAACTTTCAGTTCCTGAGTGAGGACTATGTCTCTAA10.8403361344537815No Hit
GTCCTGGCGAGCCCGGCCTACGCGGCCCCTGCCCCAGTCCAGGCCCTGCAGCAAGCGGGTATCGTCGGGGGTCAG10.8403361344537815No Hit
TTTTTTGGGTCTGCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCCTGTCT10.8403361344537815No Hit
GCTCTGAGATGGGTGCCAACAAATCGGAAAGCTTATTTTCTGCTGGCTGTTGACACTGAGAAGCTGTAACCCTGT10.8403361344537815No Hit
TATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCCTGTCTCTTATACACATCTGACGCTGCCGA10.8403361344537815No Hit
GCTTTGAACAGCAGGCATAGGGGTGAGGTCCCACTGTTTAGGGTCTTGGAGCTTCTGGTTCTGGGTGATGTTGAC10.8403361344537815No Hit
AAACGGAGACGCAGGAGAAGAACACCCTGCCGACCAAAGAGACCATTGAGCAGGAGAAGCGGAGTGAAATTTCCT10.8403361344537815No Hit
GTCCTAAGCCTGACGCCTGCACCGGGCCCTCCAGCCCTCCCCTGCCCAGATAGCTGGTGGTGGGCGCTAATCCTC10.8403361344537815No Hit
ATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCACGTGTCCCGCCCTACTCTATTCGCGCCTAG10.8403361344537815No Hit
GAAGAACCCCCAGGACTGGGCTCCCAGAGGATGAAGGAGAGGGGGTGGCGTGCCCCGAGGGAACCAGGGAGTAAT10.8403361344537815No Hit
TTGATGATCATGTGAGCCAACTCATCAATTGTCTTATTCTAAAGCAATACAAAGTCAGCAGTGATGCTGTCTCTT10.8403361344537815No Hit
ACCACTATGTCCCCAAAAAGCCGTGAGTCAGGCCTGGGTTGGCCACCTGGGTCACTGGAGGACCAACCCCTGCTG10.8403361344537815No Hit
ACAGTCGCTACGGGTCTGCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCT10.8403361344537815No Hit
TATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCTG10.8403361344537815No Hit
CCGCTCCGAGAGCGGCAGCTTCGCGCGCGGTGCGCTCGGCCTATGCCTGCCCCGAGGGGCGTCTGGTAGGCACCC10.8403361344537815No Hit
GGAAACGCTTCTGCAAAAAGATGACATTCTGGCTGACACCTGAAGCAAAAGCTGGAGCCAAACCTCCTGACAGCC10.8403361344537815No Hit
AGATCCTTCTTCTTTGGAGGGGAAAGGGGGAATTCTGGAACAGATTCTTTTGACCGAGGGCTGAGAATCCTGTCT10.8403361344537815No Hit
NATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGAACTATACAAGCAGTCTCTCTGTTTCCAGG10.8403361344537815No Hit
GTGCATCCAGTATGGGCCGTGGACTCTCAGGCTCACCTGCCAGGGCCACTTGCTCCTGGGGGCCTCCTGACCCCC10.8403361344537815No Hit
GTGTTGGTGCATGTGCTTTGGACTAGCATTTATGCTTGCAGGTGTTATTCTAGGAGGAGCATACTTGTACAAATA10.8403361344537815No Hit
GGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGCTGTCTCTTATA10.8403361344537815No Hit
TGTGAGAGCATGATCAGCCACACGGGCACTGAGACACGGGCCCGACTCCTACCTGTCTCTTATACACATCTGACG10.8403361344537815No Hit
GAGCAAACACATCCCAAACACAAACTAAAAACCCTCCCCCAAGAAAAACACTTTATCAGGACCAACAGCGTCTCT10.8403361344537815No Hit
CAACAGTATAAAAGTACCTACCTGCCTCATGTTAAGGGTCTATAACACAATGCTCACTCAGCCTTACCTTTTGAG10.8403361344537815No Hit
CAAAATACCACCTTGGCGCCTACACGGGAGACGACGTCCGCATCGTCCGTGACGACATGCTGCTGTCTCTTATAC10.8403361344537815No Hit
CGTCAAGGATCTGGCCGCCCTCAGGGTGCAACTGCGGGAGCAGCACCTCTACTACCAGGACCAGCTGCTGCCGGT10.8403361344537815No Hit
CCGGCACGGTCTGATCCGGAAATATGGCCTCAATATGTGCCGCCAGTGTTTCCGTCAGTACGCGAAGGATATCGG10.8403361344537815No Hit
GTGCTGCTCCTGAACATCGCCTTCCTGCTGAGCCCCGCATTCGCAATGTCTCCTGTGCCCGGGTCAGCATGCACG10.8403361344537815No Hit
GCACAGAGCCTCTGTAATAAGGCCACCTCCGAATCAACTATGAGAAGAAACCCTGGATCTTATAAACATCTGACC10.8403361344537815No Hit
CTACTATCCCACACCTGACAGTAATAGTCGGCCTCATCCCCGGCTTCGACCCTGCTGATGGTCAGGGTGGCCGTG10.8403361344537815No Hit
GTCTCGCGGCGTGAGCCCCAGCCATGCGGCGAAGTCGCGCCCGGAGCCGAAGGTCTCCGCCGGCGGCGCCTTCAT10.8403361344537815No Hit
CTTCTATTTCGACCGCGATGATGTGGCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAACTGGCCGAGGAGAAGCG10.8403361344537815No Hit
GTGCTGGTATCTAGCTTGTGAATGTCATTGGAAAAACAGTCCGCCTGCTGCTCGTAGCCCCCAAAAATGTACATG10.8403361344537815No Hit
TTTTTTTTTTTTGGGGTCTGCACGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTCTGTCT10.8403361344537815No Hit
GCCCAGATCGGAGCGGACATCGCCCTGCTGGAGCTGGAGGAGCCGGTGAACGTCTCCAGCCACGTCCACACGGTC10.8403361344537815No Hit
AGTGAGGAGCCGCCATGAGTCTGCCCCTGCAAGCCATCGCGCCTGACGTCTGCGCCGCCCCGCAACTGACCACGG10.8403361344537815No Hit
GTGTGGCCATCATTACTCAATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCTGTCT10.8403361344537815No Hit
GGTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCCTGTCTCTTATACACATCTGACGCTGCC10.8403361344537815No Hit
TGATCTTCTTTATAATTCTACTTTGAGTGCTGTCTCCATGTTTGATGTATCTGAGCAGGTTGCTCCACAGGTAGC10.8403361344537815No Hit
CACTTTGGGAGGCTGAGGCAGGTGGATCCCTTGAGCCCAAGAGTTCGGGACCGGCCTGGGCAACATAGCGAAACC10.8403361344537815No Hit
CTCCTTGGCCGGTGACGGCTGTGACAGTGATGGCAGGTTCAGTGCCTTCAGCGCAGAGCGTGGATGCTCTGGAAT10.8403361344537815No Hit
TGCTACCACTTTCAGGTTTAAGGTCACTCGGATGGATATCACCAATGTAGTACCTGTCTCTTATACACATCTGAC10.8403361344537815No Hit
GTGCTGTAGACGCGCAGGCCGCTCATGCTGGGGGTAGACAGACGGGCCGGCGGGCAGAGGGCGGCGGTAGCGGCA10.8403361344537815No Hit
GAGTACATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGC10.8403361344537815No Hit
CAGCCACCCAGCCGCCCAGCCGCCCAGCCCCGCACGAAACCCGGCCAGAGCTTCCTAGCAGCCCGAGCCATGAAC10.8403361344537815No Hit
CACCAGGAGCAGGAAGGTGAGGGGCAGGAGCAGCTCCCCCTGCTCCTCCCATTGCCGCAGCTCGGTATCGTGCAG10.8403361344537815No Hit
GGCCAGAGGCCTCCAGAGGCATGGAGCCCGGTGCCCCCATGCAGGCCCTGGGCTGTGCTGCCAGGGGCCGGTGGC10.8403361344537815No Hit
GTTCCCTGTCGCTGGCAGACAAGGGGAGCCTGCCCGCTGGAGAGCACAGCTTCCCCTTCCAGTTCCTGCTTCCTG10.8403361344537815No Hit
GTCCGGCTTTGATGGCCTCGCTGGCTACACTGGCCCTGTAGACGCCTGACCCTTCTCTCTTTTCTTCCATTCCCT10.8403361344537815No Hit
GTCTGGGTCCATCCTGGTCAGCTGCCCCAATGTGACCTGGGGCAGATAAAATGCCAGTCTCATTGTCACCTCTGT10.8403361344537815No Hit
TATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGAACTATACAAGCAGTCTCTCTGTTTCCAGG10.8403361344537815No Hit
GAAGTGGTGAGGAAGGGTAGGAAGAGAGGGGATCCTGAGAGAAGTGGATCAAGAAGATTTGTAACCCTGATTTCC10.8403361344537815No Hit
ACGCAGAGTACATGGGGGGGGGACACTTTCGGACATCTGGTCGACCTCCAGCCTGTCTCTTATACACATCTGACG10.8403361344537815No Hit
CCCAGGAGCTGAGTCACCTCCTCCACTCACTCCAGCCCAACAGAAGGAAGGAGGAGGGCGCCCATTCGTCTGTCC10.8403361344537815No Hit
GCTCTCTTCTGAGCCCCTTCCCCAGTCCTGAGGACCCATCCCCAAACAGAGCCCCCATACCAGTCCAAAGCCAGA10.8403361344537815No Hit
ACTTTGGAGCCTGTGATATTCTTCTTCTTTTTTATTTTGAGACAGAGTCTCATTCTGTTGTCCAAGTTGGAGTGC10.8403361344537815No Hit
TAATCACTTGTTCCTTAATTAGGGACCTGTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAG10.8403361344537815No Hit
GGAGAAGCCGAGCGGCGCAGAGGACGCCAGGGCGCGCGCCGCAGCCACCCACCCTCCGGACCGCGGCAGCTGCTG10.8403361344537815No Hit
GTCCTAAGCCTGACGCCTGCACTGGGCCCTCCGGCCCTCCCCTGCCCAGGCAGCTGGTGGTGGGCGCTAATCCTC10.8403361344537815No Hit
CCTCTGTGTCATAGCCCTGAGGGAGTCCAGAGATGAAACTATGGGCCCCAGACTTTACTGCAGCAGCTGTGATTT10.8403361344537815No Hit
AAAAACAACTTGACCAAAAATTTATCACAAAATTTTAAGACCCAATAAAAAAAATAAATAAAAAAAAAAAAAAAA10.8403361344537815No Hit
CCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCTGCCGACGAAGAGGATAGTGTAGATCTC10.8403361344537815No Hit
GGCTGCAGGCGGGCGTGGTCAGCTGGGGCGAGGGCTGTGCCCAGCCCAACCGGCCTGGCATCTACACCCGTGTCA10.8403361344537815No Hit
CATCCTACCTCACCCCAAGCAATTTCATGCTAAGAAGACGAGAGGCCGGGCGCCGTGTCTCATGCCTGTAATCCT10.8403361344537815No Hit
GCCCAGATGCCACAGAAGCCGAAGAGGATTTTGTGGACCCATGGACAGTACAGACAAGCAGTGCAAAAGGCATAG10.8403361344537815No Hit
GTTCAAGTTCTTTCTTCAAAGAGTCATCAGAATAACATGGATTGAAGAGACTTCCGAACACTTGCTGTCTCTTAT10.8403361344537815No Hit
GCACCCCCACTCAGCGGGGAGCCACAGGAGGCTGAGCGGCGGTGACCTCGAGAAGGCCTAGGGGAGGAGGCTGGT10.8403361344537815No Hit
GGGTTCTGCTACTCCCCAGACCTCAGGGACAACTGCCGGGGGTTCAGGGTTGGTAGCAGGGAGTACCCAGTGCCT10.8403361344537815No Hit
GTCTCACACCCTCCAGAGGATGTACGGCTGCGACGTGGGGCCGGACGGGCGCCTCCTCCGCGGGCATAACCAGTT10.8403361344537815No Hit
CTGTCATAGTGGGGTAGCATCCGACGTGCTGCAGGCCTCAGGACCCACGTGAGTCAACTTGATTGTTTGAAAAGT10.8403361344537815No Hit
CCATTTTAGCGCCGCCCGCCGTCGCCATCTGTTTCCCTTCCCTCCCCCATACCTAGCCCGAGTCTGAGCCCTAAC10.8403361344537815No Hit
GGAGGGCCCGGTGCAGGCGTCAGGCTTAGGACAGGGAAGGGGGCTCAGGATAGGGAAGGGTCCTCAGGACAGGGG10.8403361344537815No Hit
TATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGACTGTCTCTTAT10.8403361344537815No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCACATGTACTCTGCGTCTGTCTCTTATACACATCTGACGCT10.8403361344537815No Hit
GAATGGCACCTGGCTGCAGGCGGGCGTGGTCAGCTGGGGCGAGGGCTGTGCCCAGCCCAACCGGCCTGGCATCTA10.8403361344537815No Hit
GTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGATTTTGTGCTG10.8403361344537815No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTCTGTCTCTTATACACATCTGACGCT10.8403361344537815No Hit
GAGCAGGAGGGGTCAGAGTATTGGGACCGGGAGACACGGAGCGCCAGGGACACCGCACAGATTTTCCGAGTGAAC10.8403361344537815No Hit
AGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGG10.8403361344537815No Hit
GTCCCGCTTTGATGGCCTCGCTGGCTACACAGGCCCTGTAGAAGCCTGAACCTTCTATCTTTTCTTCCATTACCA10.8403361344537815No Hit
TCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTCCTCCGCCGCCGCGGACTCCGGCAGCTTTAT10.8403361344537815No Hit
ACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCCTGTCTCTTATACACATCTGACGCT10.8403361344537815No Hit
GTGTGGGGGGCAGTCGCCACCTGGGTAGGAAGCAGTGGTGTTTTGGACAGCAGGGGTTGGTCCTCCAGTGACCCA10.8403361344537815No Hit
CTTATCTCCACTATCCCCCTCCTCGCCCTCCTAACGCCACTGAAATGAGAAGGAATGAGGGTGGGGCTGTCTCTT10.8403361344537815No Hit
AACAAGGACTGCTCTGTGTCCTCACAGATGAATGAGGTCATGCTGGGAATTCCCTCTGCAGGGAACTGGCCTGAC10.8403361344537815No Hit
CCTCTGCAGTACATCTACACCCTGTTTCTGGAGCACGATCTCAGCCTGGGAACCCTGGCCATGGAGACAGTGGCC10.8403361344537815No Hit
GACGATGCGGACGTAGTCTCCAGTGTAGGCGACAATGTGGTATTTTGCGTCACAAATGTTGTTTTCCATTATGGG10.8403361344537815No Hit
CAGCAGGGTCATGAGACAGCCGCCTGTCCGGAGACTGAAGAGATACCGCAGGGAGCCAGTGGCTGCTGGAAGGAT10.8403361344537815No Hit
CATTAATATGCACCAGATTTCCCCGACACGGGCATGTCTGTTTGGCATCCATCCCATGTACTCTGCGTTGATACC10.8403361344537815No Hit
GAGTACATGGGGACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCATCCGCCTCCTTGCTCGCCGCAGCC10.8403361344537815No Hit
AAGGTCTCTATCTTGCGGAGGATGGGCTCGGGCACCTGGATGGTGCATGGTCGGCGCTGGGTCTCACCCAGCTCA10.8403361344537815No Hit
TATCAACGCAGAGTACATGGGAGGTTACAAAAGACAGACTGTCCCTATGCTTGTGCAGCTTACAATCTATTTAAC10.8403361344537815No Hit
TCTTGAAGTAGGGCAGGACACTTTTTTAGCATGAATTGCTGATCTTCTTCAAGGGTCTCAGGAATTTTCATTCTA10.8403361344537815No Hit
AGCCCAAGTTGTGGGCCTGTGGCAGAGACTTCTTCTATTGGAAATGGTGATGGTATTTCAAAACTGATGAGTGAA10.8403361344537815No Hit
GGCCGGGCTCGCCAGGACGGGCAGCGCCAGCAGCAGCAGGCTCAGCATCCTGGCCACTCCCTGTTCCTTCTCCTG10.8403361344537815No Hit
CTGTCTTTCGGCCTCCTCCCCATGTACTCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGAGGATAGTGTA10.8403361344537815No Hit
CTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAAT10.8403361344537815No Hit
CCTCAGGACAGGGGAAGGGGCTCAGAAGAGAGCAGGGGGCTTAGGACAGGAACTGTCTCTTATACACATCTGACG10.8403361344537815No Hit
CCCCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGA10.8403361344537815No Hit

[FAIL]Adapter Content

Adapter graph