FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296062

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296062
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences185
Sequences flagged as poor quality0
Sequence length75
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG147.567567567567568No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG147.567567567567568No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT94.864864864864865No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT84.324324324324325No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT84.324324324324325No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT73.783783783783784No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG73.783783783783784No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA63.2432432432432434No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA52.7027027027027026No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT52.7027027027027026No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATA52.7027027027027026No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC42.1621621621621623No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG31.6216216216216217No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC31.6216216216216217No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCGCTTGGCCTTGTCGCGGCTCTTG31.6216216216216217No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC31.6216216216216217No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC21.0810810810810811No Hit
TCCAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG21.0810810810810811No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA21.0810810810810811No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGNGAAGGGGCCCTG21.0810810810810811No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA21.0810810810810811No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCGCTTGGCCTTGTCTCGGCTCTTG10.5405405405405406No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCAGGGGCACCAGCAGCGGGTAGCCGGCAA10.5405405405405406No Hit
TAACATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.5405405405405406No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCCGCCCGGCAGGTGGCGCGGGAGGCTGCGCGTTCCCCGCCCCCC10.5405405405405406No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGTGGCCCCCTCAGTGA10.5405405405405406No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTACGGTCGGTAGTACCTGTGCACCACTTCTGCNCCTGCGCACATT10.5405405405405406No Hit
GCACAGGTCGTATAAGCATTGGCGGAAGTACTCAGAGAGACGCAGCACCGCCTGGCAGGTCGCGAAGAGGCCCTG10.5405405405405406No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCTCAGCTCGCGGCCGTCCAGCACGGCCC10.5405405405405406No Hit
GTCCAGGGGGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGAGGATGGGTAGGGGGAT10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAACAGCACTCTGCACAGCATCATCCAT10.5405405405405406No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCCAGC10.5405405405405406No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTTCCCCTGCGCACATG10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTGCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.5405405405405406No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGATGCTGCGCGGGGCCCGCGCCCC10.5405405405405406No Hit
GCACAGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCNAAGGGGCCCTGG10.5405405405405406No Hit
CAGTGACATGTATTCCCCCGCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT10.5405405405405406No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTNGGAAGAAGTAGG10.5405405405405406No Hit
GACACTTGTCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGTGTCACCAGCAGCGGGTAGCCGTCAA10.5405405405405406No Hit
CCATCACTCCCTTCCCTTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCANAGCATCATCCAT10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCAGCCAT10.5405405405405406No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAACAAACACTCGGAAGAAGTAGG10.5405405405405406No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGAGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.5405405405405406No Hit
GACACTTGGCCTGTAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCCCCAGCAGCGGGTAGCCGGCAA10.5405405405405406No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTAGCGAAGGGGCCCTG10.5405405405405406No Hit
GGCTGTGGTGTGAGTCCGGTTGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC10.5405405405405406No Hit
TAAAATAGTAGCCCTCCCGCACTCATCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.5405405405405406No Hit
GCACAGGACGTATACGAAGTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCCGCCCTTGCCACCTTCCCATACGCAGCACTCTGCACAGCATCATCCAT10.5405405405405406No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTTTCAGAATGGCCGGGATGCTGGTGGC10.5405405405405406No Hit
TCTCGTGCTGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCCG10.5405405405405406No Hit
CAAGCAATNAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCTTAAGCAGCACTCTGCANAGCATCATCCAT10.5405405405405406No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACGCTTAACGGCCCC10.5405405405405406No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTCTCCCTGCAGCAGGGGCAGCAACGG10.5405405405405406No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTNGGCAGAAGTAGG10.5405405405405406No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGTGGGAGGCTGCGCGGGGCCCGCGCCCC10.5405405405405406No Hit
CAACCAAAAGAACCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTTGGAAGATCTCTTATGCCGTCTT10.5405405405405406No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT10.5405405405405406No Hit
GTAGTACTGCTCGTACAGGTAGCAGGCCAACACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCAGAT10.5405405405405406No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACGAAAGCCACCGCAGCAATAAGATGGAGGACCGCATTGACTACCTGA10.5405405405405406No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCGCCACAGCAATAAGCTGGAGTACCGCATTGACTACCTGC10.5405405405405406No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCCCTTCTGCCCCTGCGCACATG10.5405405405405406No Hit
GACACTTGGCCTGGCGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.5405405405405406No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGC10.5405405405405406No Hit
TCCAATAGTAGCCCTCCCGCACTCACCAGGTCCGTTCTGTAGTACCTGTGCACCCCTTCTGCCCCTGCGCACATT10.5405405405405406No Hit
ACCTCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA10.5405405405405406No Hit
ACATCAGCCTCTTTATTCTCAGCATTTACAAAAGCCACCACAGCAATAAGCTTGAGGACCTCATTGACTACCTGA10.5405405405405406No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCAACCTTTCAACAACTCCTGTT10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACACTGCAGCCCTTGCCGCCTTCCCATAAGCAGCAATCTGCACAGCATCATCAAT10.5405405405405406No Hit
TAAAATAGTAGCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATGG10.5405405405405406No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGNGAAGATGCCGAT10.5405405405405406No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCACACACTCGGAAGAAGTAGG10.5405405405405406No Hit
CACAGGTCGTATACGCAGTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCNAAGGGGCCCTGG10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCAGTCTTCCCATAAGCAGCACTCTGCACAGCAGCATACAA10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCTTCATCCAT10.5405405405405406No Hit
GTTTCCAGTTCAAGGGTAACGGAGCGTGGACAAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.5405405405405406No Hit
GTCGTGCTGCTCGTACAGGTAGCAGACCACCACAATGCTGGCGGGGACCGTGTAGATCAGCGTGAAGATGCCGAT10.5405405405405406No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGAGGTNGGGTAGGGGGAG10.5405405405405406No Hit
CAGTGACATGTATTCCCCCTCTTACCTTACGGCTGTGGTGCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTGTTAT10.5405405405405406No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGNGCAGGGGCCCTG10.5405405405405406No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCCCTCTTAACGGCCCC10.5405405405405406No Hit
TGGAATAAGTTCAGTCTCACAGCATTTTACTGGCACCGGGTCATTCTTTTTAATATGTGCTTTAGACTCTCCCCT10.5405405405405406No Hit
TAAACTAGTAGCCCTCCCGCACTCACCAGGTCCGTTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.5405405405405406No Hit
TTTCAGGGCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCCAATTTCAGCTCCATTGGGATCATG10.5405405405405406No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGGGGATGGGTAGGGGGAT10.5405405405405406No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCATCACCCTTTCAACAACTCCTGTT10.5405405405405406No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGAGGCCGTG10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCAGCCAT10.5405405405405406No Hit
CTTTGACAGCATCACGCGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG10.5405405405405406No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACATTCCCATAAGCAGCACTCTGCACAGCATCATCCAA10.5405405405405406No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTATGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA10.5405405405405406No Hit
CCTGACTCACGTTTCCTTATTGCTGGGATGTTCACAGAGCCAACGTCTTGGAAGGCGGGGACCCAACCTTCCCAC10.5405405405405406No Hit

[OK]Adapter Content

Adapter graph