FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296082

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296082
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2518
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCG78131.016679904686256No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC63125.05957108816521No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGT2238.856235107227958No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAG1014.011119936457506No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCG411.6282764098490867No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCG250.9928514694201748No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCT160.6354249404289118No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGA150.5957108816521048No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC120.47656870532168394No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTT110.4368546465448769No Hit
AACTGTAGCTTACACTGACTCCGAGCCCACGAGACCATCGACCATCTCGT110.4368546465448769No Hit
GGTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTG110.4368546465448769No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTG100.3971405877680699No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCC100.3971405877680699No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCT100.3971405877680699No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGC90.3574265289912629No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGT90.3574265289912629No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCCCCACGTTGC80.3177124702144559No Hit
CCTGACTCACGTTTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCG80.3177124702144559No Hit
CAAGCAATCAAGGCCAGTCTCTTATACACATCTCCGAGCCCACGAGACCA80.3177124702144559No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAG70.2779984114376489No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGG60.23828435266084197No Hit
GGCTGTGGTGTGAGTCCGGGTGGCGGCCGTAGCGCGCCATTTGCACCCGC40.15885623510722796No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACAG40.15885623510722796No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGCCCG40.15885623510722796No Hit
GTAAAAGTTGAAATGTCAGGGCCAGTCACAGTTTTGACTAGACAAAACCA40.15885623510722796No Hit
GTAGTGCTGCCCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCG40.15885623510722796No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGC40.15885623510722796No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAAT40.15885623510722796No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAG40.15885623510722796No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTT40.15885623510722796No Hit
AACTGTAGCTTACACATCTCCGAGCCCACGAGACCATCGACCATCTCGTA30.11914217633042098No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGATGGCGGGGACCG30.11914217633042098No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTCGC30.11914217633042098No Hit
GTTATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC30.11914217633042098No Hit
CATAGTTACCTTCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCG30.11914217633042098No Hit
GTAGTGTTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCG30.11914217633042098No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCAACACAATGCTGGCGGGGACCG30.11914217633042098No Hit
CCTGACTCACATCTCCGAGCCCACGAGACCATCGACCATCTCGTATGCCG30.11914217633042098No Hit
GTCATTTTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGC30.11914217633042098No Hit
TGAATGAGGTCAAGAGGATCTGGTGAGCCCTGGCAGAGAGGACTTATATA30.11914217633042098No Hit
CAAGCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC30.11914217633042098No Hit
GGCTGTGGTGTGAGTCCTCTGGTGGGCCTTTAAGTGGGAGCTTTTTGTAT30.11914217633042098No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)