FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length75
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT1221.428571428571427No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG814.285714285714285No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT35.357142857142857No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTCCAGCACGGCCC23.571428571428571No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC23.571428571428571No Hit
GTTTCCAGTTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA11.7857142857142856No Hit
ACATCAGCCTCTTGATTCTCAGCATTGACAAAAGCCCCCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.7857142857142856No Hit
GTCATTGTCACTGATCAGCTCCAGCACCTTCTGCTGCGTCTCCACATTGCTCTGCTTGGCCTTGTCGCGGCTCTT11.7857142857142856No Hit
GTAGTGCTGCGCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT11.7857142857142856No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGTCTTGTCGCGGCTCTT11.7857142857142856No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCATG11.7857142857142856No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCACTAAGCTGGAGGACCGCATTGACTACCTGA11.7857142857142856No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCTTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT11.7857142857142856No Hit
ATGCTCAGTTGTAGGTGATTCTCACTTTACAACTTGTAATGGTCGACATTATTCTTTTATTGTCATGTGCCGATA11.7857142857142856No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGTCTCTT11.7857142857142856No Hit
TGGAATAAGTTCAGTCTCACAGCATTTCATAGGCACCGGGTCACTCTCTTTAATATGTGCTTTAGAACCTCCACT11.7857142857142856No Hit
GGCGGTGGGGTGAGTCCGGGGGACGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGTACAGCACGGCCC11.7857142857142856No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTACACGTTGCGCTGCTTGGCCTTGTCGCGGCGCTT11.7857142857142856No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTTCGCTGCTTGGCCTTGTCGCGGCTCTT11.7857142857142856No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGTCCTTGTCGCGGCTCTT11.7857142857142856No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACNCTTAACGGCCCC11.7857142857142856No Hit
GGCTGTGGTGTGAGTCCGGGGGGCGGCCGTAGCGCGCCATTTGCACCCGCAGCTCGCGGCCGNCCAGCACGGCCC11.7857142857142856No Hit
ATAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT11.7857142857142856No Hit
GTCATTGTCACTGGTCATCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT11.7857142857142856No Hit
GCACAGATCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG11.7857142857142856No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.7857142857142856No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCTACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT11.7857142857142856No Hit
GTCATTGTACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTTG11.7857142857142856No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACCAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA11.7857142857142856No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG11.7857142857142856No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGCGGACCGCATTGACTACCTGA11.7857142857142856No Hit
ATCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCGTGTCGCGGCTCTT11.7857142857142856No Hit
AAAGTCTCTGACGTGGATGAGTGTGGGAGTGGGGGAGGTCGGGAGGAGAAAAAACGGAGTGTTGACAGTCAGGTA11.7857142857142856No Hit
GAAGATGCTGATTCTCTTGCAGGAACTCACCCACTCATCCTGCAAAGCTTTCAGAATGGCCGGGATGCTGGTGGC11.7857142857142856No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)