FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGCTGTCTCTTATACAC21.7857142857142856No Hit
GCAGAAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21.7857142857142856TruSeq Adapter, Index 25 (96% over 27bp)
GCCGCCCGGTGCTGCTGAGCAAGATCGAGGGGCACCAGGACGCCGTCACGGCCGCGCTGCTCATCCCCAAGGAGG21.7857142857142856No Hit
CCATTGTGACTGTGAATGAGAACCTGTACTTCCAGAGCGAAGCGAGCCCAAGAGCTGCGACAAGACCCACACCCC10.8928571428571428No Hit
ACGCAGAGTACATGGGGAGGCATCCGCAGGGCGCGGCAAGATGGAGGTGACGGGGGTGTCGGCCTGTCTCTTATA10.8928571428571428No Hit
ACTAAGGCAGGAACAGAAAACCAAACACAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAG10.8928571428571428No Hit
GCTCGGAACCGAGCCTCTGTCTTTCGGCCTCCCCATGTACTCTGCGTTGATACTGTCTATTATACAAATCTCCGA10.8928571428571428No Hit
AAACATAGTAAATAGGCAGAAATACATATCCACCCATCATATAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
AGGTCTCGCAGTCAAGCACGCTTATGCCAATGCACTATCGTCACGATTTCCGACCGTAACTAGCGTACCTTCGAA10.8928571428571428No Hit
CACTAAACTCGGGCCGCGGCGGGGCGAGCGAGGCGGGCTCCGGAGGGAGCTGACGCCTGATGATGGCGCAGTCCA10.8928571428571428No Hit
CAGAGATAGTCTGGAACTTGTAACCTCCCAAGAACACTGCGTAGAAAACCTGTCTCTTATACACATCTCCGAGCC10.8928571428571428No Hit
GGTATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGATTTTGCTGT10.8928571428571428No Hit
GGCAAATTAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACCGAAAGGTATCGTATTCTGAATACATAGGG10.8928571428571428No Hit
CTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGAC10.8928571428571428No Hit
GTGTAGAATAGGAAGTATGTGCCTGCGTTCAGGCGTTCTGGCTGGTTGCCTCATCGGGTGATGACTGTCTCTTAT10.8928571428571428No Hit
GGGCTGCAGGCCGCCGCCGCCGATGGCGAGCTGTGGAATCTGCGCTTCACAAGCGTGCCCGAGCCGGAGCAGACC10.8928571428571428No Hit
GTCAGCAGCACGGGGTGCTCCTCGGGAGCCACACGCAGCTCATTGTAGAAGGTGTGGTGCCAGATTTTCTCCATG10.8928571428571428No Hit
GAACAAAAAAATAATGACCACATCAACAAACAAAAAAAAATCGTGCGGCGCGTCCTGAGGCAGTTCCGCTTTCAG10.8928571428571428No Hit
ACAGTCGCTACGGGTCTGCTCGGAACCGAGCCTCTGTCTTTCGGACTCCTCCCCATGTACTCTGCGTCTGTCTCT10.8928571428571428No Hit
GGCTGGGGGCCAGGGCTGGATGGACAGACACCTCCCCCTACCCATATCCCTCCCGTGTGTGGTTGGAAAACTTTT10.8928571428571428No Hit
CCAAAAAACTCTTAAACATTAAACATCAAAAAAAAAAAAAGTTGATACCTGTCTCTTATACACATCTCCGAGCCC10.8928571428571428No Hit
GAAGAAATCTAGAATCCAGTAATAATCATGAAAAAAAAAAAGGATGACGTTGCCGCCATCTCCGCCGTTGCCGCC10.8928571428571428No Hit
AAATAAATCAAATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAATAAAAAAAAAAACA10.8928571428571428No Hit
CCCTTGTCCTTCACTTGTGAGTGGATTTCTAGCATCTGCTCACACTCGACTTTGGCCAGAAAGAGCTCAAAGGAG10.8928571428571428No Hit
ATCAACGCAGAGTACATGGGAGGTTACAAGTTCCAGACTATCTCTGTGTGAATTGTGGTGAGATTTTGTGTATCT10.8928571428571428No Hit
GTACATGGGAGGTTACAAGTTCCAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCG10.8928571428571428No Hit
GCTCAATACGCACATTAATTCTCTTGGCAAGAATCTTGCCCTTAACTTGTTTGTTTACAACAATGCCAACAGCAT10.8928571428571428No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTGTGCGGGGAACCCCGCCGGTGTGTTTAGGCCACCACCCCA10.8928571428571428No Hit
CCTCAGCAGAAGCCCCTGCGCTGGCTGCCTCAATGCCTCCCATGTACTCTGCGTTGATACCCTGTCTCTTATACA10.8928571428571428No Hit
GCACGGAACTAGTATTACCTCTACTGCATGAAAAAAAAAAAGGCCTTGAGCTGCTCGAAGGCTGTCTCTTATACA10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTACTGTCTCTTATACACATCTCCGAG10.8928571428571428No Hit
CAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTGTGGGCGGAACCGCCCAGGTTAGTTGGGGCGACAA10.8928571428571428No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTAAAATAAAGGCCCCAATAAAAAAT10.8928571428571428No Hit
CATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA10.8928571428571428No Hit
CTTTCAAAGAGAAAAAAACTTATCTGCGGTTTCCTCAAGCTCCGCCTGCCCCCTCAGCAGAAGCCCTGTCTCTTA10.8928571428571428No Hit
GGACCACACCACCCTCCTCAGTGAGGTGATGACGCCAAGGATTGAACTGGTGGTGGCTCCAGCAGGTGTGACGTT10.8928571428571428No Hit
GGAGGAGGCCGAAAGACAGAGGCTCGGTTCCGAGCAGACCCAAAAAACTGTCTCTTATACACATCTCCGAGCCCA10.8928571428571428No Hit
ATCCACGGTCGCAAGACCGCGAGTATCGGTGTGCGCCTGCCATCTTTCTGGTTAACCAGACGCACTTAACTGTGC10.8928571428571428No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTGTTTAAGCCCGGTGAGTTTAAAAAAAAACC10.8928571428571428No Hit
TCCTGCCTGTGGGTTTGATTGCTACCACTCTTGCAATTGCTCCTGTCCGCTTTGACAGGGAGAAGGTGTTCCGCG10.8928571428571428No Hit
GAAAACAGCATCTGACATAAAGACACCTCCACATGAACACATTTAACATATACACAACTACAAACCCAACACAAT10.8928571428571428No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGAAACCCAAAAACAAAAAAAAAAAACA10.8928571428571428No Hit
GTTAAAAACAAGACTGCCCAACATATATAAAGCATGTCAATATTAAAAATACAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
GGCGGGGGCTGGGGGCAGTTCATCCAGAGGTGGCTCCGAAGCTGAGGTCAACCTTGGCGGCTGGCTCGCCTACTC10.8928571428571428No Hit
AATAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTAGAGGAACCCCCCCAATTTTTTTTGGCCCAAA10.8928571428571428No Hit
GTAAAAAATAATATTAAATTTTTATATATTATTAAAGGGGAGCCACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
CACAAAATCTCACCACAATTCACACAGAGATAGTCTGGAACTTGTAACCTCCCATGTACTCTGCGTTGATACCTG10.8928571428571428No Hit
TATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGTCGCTACGGGTCTGCTCCTGTCTCTTATACACATCT10.8928571428571428No Hit
ATAAAATAATTATATATTATTAAATTTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAATCCTG10.8928571428571428No Hit
CCCATCAACTGCATGAATGTCTAGAGCTTCCTTTGATTCAAAGGAAACAAAGAGAACACCATCCACATCTTCCAG10.8928571428571428No Hit
GCGTAAATCTAACTTTCTTCCCACAGCACTTTCTCGGCCTATCCGGAATGCCCCGACGTTACTCGGACTACCCCG10.8928571428571428No Hit
TATCAACGCAGAGTACATGGGGGGGGGGACACTTTCGGACAACTGGTCGACAACCAGCATCTGTCTCTTATACAC10.8928571428571428No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCCCGGGGGGGGGGGGGGGACAGAAGGGC10.8928571428571428No Hit
GTAAAAACGCAGAATACATAAAAACATAAAAACTTAAACAATAACACAAAAAAAAAACAAAAAAACAAAAAAACA10.8928571428571428No Hit
CCCTACTTTAGACTCCTAAGAGGTAGGGTTGCAGGCATAAATTACCAGCATATGGTTTAATTCTGTAAAAGATCT10.8928571428571428No Hit
AGCCAACCCAGTCCTCAGAGCATGAAGAAACATGGCTGTCTGATGGCATTGAGAATGTGTATTGGCCTGGACAAT10.8928571428571428No Hit
ATCATGTCTGGTCGCGGCAAAGGCGGAAAAGGCTTGGGGAAGGGTCTGTCTCTTATACACATCTCCGAGCCCACG10.8928571428571428No Hit
GTACATAAATCTACTGCTGCACTGCCGCCCATGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGAGCCC10.8928571428571428No Hit
CATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAATCGGAGTAGCCCTCG10.8928571428571428No Hit
ATCAACGCAGAGTACATGGGAGGTTACAAGTTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGACGTC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGGAGGAGGCCGAAAGACAGAGGCTCGGTTCCTGTCTCATATAACCAACACCGAG10.8928571428571428No Hit
TATAAAAACACAGAAAAATTTTAAATTAAATAATATAAATTAAATAAGAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCACACAATTAGTGTGCGATATTACAGGT10.8928571428571428No Hit
TATAAAATCAGAGTAAAAAAGTAACACACAATCAATGTGAGAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
CACTCTCACTGAATCCACGGAACCCACCAAAAAAAAAAAAAAAAAAAAACACAACAACTATGAAAAAAAAAGAAT10.8928571428571428No Hit
AAAAAAAACACAGAAAATATACAACAGAAACAAATAAACATGAAACTTAAACAAAACACCCAAAAAAAAAAAAAA10.8928571428571428No Hit
ATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGG10.8928571428571428Illumina PCR Primer Index 7 (96% over 27bp)
AAAAAATCATAAACATAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACAAATAAAAAACA10.8928571428571428No Hit
AAACAAATCTCCTATCCCAACATAATCTACATAAAAAAATATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGG10.8928571428571428No Hit
ATCAACGCAGAGTACATGGGAGGAGGCCGAAAGACAGAGGCTCGGTTTCTGTCTCTTATACACATCTCCGAGCCC10.8928571428571428No Hit
GTATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAGCAGTCTCACTGTCTCTTAT10.8928571428571428No Hit
ATCAACGCAGAGTACATGGGAGGTTACAAGTTTCAGACTATCTCTGTGTGAATTGTGGTGAGATTTTGTGTAAAA10.8928571428571428No Hit
AAAAAAACTAAAAGTACATGAGACCTAAAAACATACACACTATAACCAGAAGCAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
ACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTCTGTCTCTTATACACATCTCCGAGCCAAAAAACA10.8928571428571428No Hit
AAATAAGGGTATATTTAGTAGGAAACAATTCCATTGGATAGAACAGATTTGGAGACTCATCCCATAATTTTGGTC10.8928571428571428No Hit
GATCTAAGAACACAAAAATTCACAAAATAATAGGTAACAGAGTGAGACTCATAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
TATCAACGCAGAGTACATGGGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCTCTCTGCTTCCAGG10.8928571428571428No Hit
GGCTTTGTTGTCCGCGACAGGCTCGGGTGGTTGCTTCAGAATTTTGCACTTTTGCCAACTGGGACAGAGGTCGCA10.8928571428571428No Hit
GAGTGACATGGACTCGCCGTTCTCGCAGGGCATACATGCCAGCTTCTGTGCACACGCCCTTCACTTCAGCCCCTG10.8928571428571428No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTGCGGGGACCCCCCCGAGGGTTTTGGGGCGACACCCCAA10.8928571428571428No Hit
GTCCAGGGTGTGCACGCGGCGGTCCAGCAGCACGACGTTCTGCAGCGGCGGTGGCAGCTTGAACTTCAGGCCTGG10.8928571428571428No Hit
GTCTCAAACTCCTGACCTCAAGTGATCCATCCGCCTCAGCCTCCTAAAGTGCTGAAATCACAGGTGTGAGTCACC10.8928571428571428No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCCGGTGGGGGGGGGCACCCAGTGTG10.8928571428571428No Hit
GTGGAAGGGCTTCTACTACTCCCTCAAACGCACTGAGATGAAAATCCGCCGGGCCTGAAGGGCTTCTGTCTCTTA10.8928571428571428No Hit
CATTATACACTTGCTCTTGAGATGTGCTTGACTGGAACACCCGATCAAATGCATAAGGCTTGGTCGCGATCACGA10.8928571428571428No Hit
GCTCTGGTTGTGGGACATGAACTCGCCCATCAATGGTTTGGAAATCTTGTTACTATGGAATGGTGGACTCATCTT10.8928571428571428No Hit
CACTTTCGGACATCTGGACGACATCAAGCATATGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG10.8928571428571428No Hit
CAAAAAAAAAAAAGAACATTTCAGATAACAACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
GAATATGATGGAGGCTCTCCTGTGACAGGGTACTGGCTGGAAATGAAAGACACCACTTCAAAGAGATGGAAGAGA10.8928571428571428No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTAAAAATTTCACATTTACAAATATAATA10.8928571428571428No Hit
CCTCTGTCTTTCGGCCTCCTCCCCATGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGAG10.8928571428571428No Hit
GTTCCGACCTGCACGAATGGAGTAATGATGGCCACACTGTCTCCTCCAGAGACTCAGCGAAGTTGAAATGTTTGT10.8928571428571428No Hit
CAAACCCCACTAACCAAAGAGAATCATTGAATAATACATAAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
AACAACGCAGAGTACATGGGCACAACACATTACTCATGTCTCTTATACAAATCTCCGAGCCCACGAGACTCGACG10.8928571428571428No Hit
CCACGACACAATGCCATTCATTTTTGCACAAAATCTCACCACAATTCACACAGAGATAGTCTGGAACTTGCTGTC10.8928571428571428No Hit
GAAGAAGACACAAACAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAACA10.8928571428571428No Hit
GACAGGGCGCCGCTCGGAAGGGCGGGTACCAGTGGCGAGTCCAGGGTCACCCACATACCATGCCTGTCTCTTATA10.8928571428571428No Hit
TGATAGAGTTACGGTAGCAGAGACTTGGTCTGGAACAAGTAACCTCCCATGTACTCTGAGTTGATACCCTGTCTC10.8928571428571428No Hit
AATAAACAAAGAATACAACTTTAAATTAAATAATATAAATTAAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8928571428571428No Hit
GCAAAAAACTCATATTACATCTTCAGCATGAAAAAAAAAAGTCGCTACGGGTCTGCTCGGAACCGAGCCTCTGTC10.8928571428571428No Hit
CCAAAAAACAAAAATAAATAGTATGGAACTTTTAACCAAACATTTACTCTTAAAATTTATCATATAAAAAAATCC10.8928571428571428No Hit
CGGCATGCGCGATGCCGATGATCGCGTGGCTGCAGCCGGTGTCGGCGAGTGTGCCGGTCGCCCGCATGCGCCAGC10.8928571428571428No Hit
TAAAAAAAGAAAATAAAATTACAGCAAAACTAAACACAGATCATACTATAATACAAAACACCAAAAAAAAAAAAA10.8928571428571428No Hit
CGTCAAAAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAACACATAAAAAAAAAAAAA10.8928571428571428No Hit
ATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTC10.8928571428571428No Hit
GCGCAGGTCCAGCACCACGCCGTCCAGCTTGTCGTTCTTGAAACCGGCCAGCAGCTTGGCCTCTGTCTCTTATAC10.8928571428571428No Hit
ACGAACATAACAACGTACCAACGAACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATATAAATAATA10.8928571428571428No Hit
GTGCAGGTTCTCACTCTCTTCCAGAATATTCTCTCCAACAAAAATGTTGGGATTTGCAAACAGGATATCCATCAG10.8928571428571428No Hit

[FAIL]Adapter Content

Adapter graph