FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002296479

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002296479
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130
Sequences flagged as poor quality0
Sequence length75
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT86.153846153846154No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG86.153846153846154No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCGGCAA75.384615384615385No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT53.8461538461538463No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCC43.076923076923077No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG43.076923076923077No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGTGAAGATGCCGAT43.076923076923077No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT32.307692307692308No Hit
ATAGCAGAATCATCGTGGTCTCCAGAAGTGCCCACGTTGCTCTTGCCGCTCCCCCTGCACCAGGGGAAGCAGTGG21.5384615384615385No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT21.5384615384615385No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTCAACAACTCCTGTT21.5384615384615385No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACCTG21.5384615384615385No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTTCACCACTTCTGCCCCTGCGCACATG21.5384615384615385No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA21.5384615384615385No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGG21.5384615384615385No Hit
CCTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCGGCACCCTTTCAACAACTCCTGTT10.7692307692307693No Hit
CAAGCAATCAAGTCCAGTCTACCCTGCCGCCCTTGCAACCTTCCCATAATCAGCGCTCTGCACAGCATCATCCAT10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCATCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCCCTCTGCACAGCATCATCCAT10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCATTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.7692307692307693No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCACTAAGCTGGAGGACCGCATTGACTACCTGA10.7692307692307693No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCTGG10.7692307692307693No Hit
AAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGACGACTGCCAATAAGCAGCAGTAAGCAAAGCATAATACAA10.7692307692307693No Hit
CTTTGACAGCATCACGAGTTTCACCGGGATCAACAATGCCATACTCATTTTCAGCAAAAACTCGGAAGAAGTAGG10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTACACAGCATCATCCAT10.7692307692307693No Hit
AAAGCAGTCAAGGCAAGTCTACCCTGCAGTCCATGCTGCCGTCCCACAAGCAGCACTCTGCACAGCATCAGCCAT10.7692307692307693No Hit
GTCATTGTCACTGGTCAGCTACAGCGCCTTCTGCTGCGTCTCCACGTTGCGCTACTTGGCCTTGTCGCGGCTCTT10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCAATAAGCAGCACTCTGCACAGCATCATCCAT10.7692307692307693No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCCCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGT10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTTCCCCTGCGCACATG10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCAAT10.7692307692307693No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCGCAGCAATAAGCTGGAGGACCGCATTGACTACCTGA10.7692307692307693No Hit
GTCATTGTCACTGGTCAGCTCCAGCACCTTCTGCTGCGTCTCCACGTTGCGCTGCTTGGCCTTGTCGCGGCTCTT10.7692307692307693No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCCGGTCGCGAAGGGGCCCTG10.7692307692307693No Hit
CAACCAAAAGAACAGCCTGTCTCTTATACACATCTCCGAGCCCGCGAGACCAATCCTCATCTCGTATGCCGTCTT10.7692307692307693No Hit
CAAGCGATCAAAGCCAGTCTACCCTGCCGCCCTTGCCACCTCCCCGTACGCATCAATCTGCGCAGCGTCGTCCAT10.7692307692307693No Hit
ACATCATCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGCATTGACTACCTGA10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATACAT10.7692307692307693No Hit
TCTCTTTCTCGCCGCTGCCGCCCAGCGGCTCCTGGACGTCCTGTTGAGCTGGCTGCTTCGCATGGCCCTCGCCCC10.7692307692307693No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAACGCCACCGCAGCAATAAGCTGGAGTACCGCATTGACTACCTGA10.7692307692307693No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCATGCTTGAGGATGGGTAGGGGGAT10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTATCTGTGCACCACTTCTGCCCCTGCGCACATG10.7692307692307693No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTCACGGCCCC10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACAGCTTCTGCCCCTGCGCACATG10.7692307692307693No Hit
CCTTTAACGAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTGCAATCAGCACCCTTTAAACAACTCCTGTT10.7692307692307693No Hit
AAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCAATCTGCACAGCATCATACAA10.7692307692307693No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGTACTCAGCACCGCCTGGCAGGTCGCGAAGGGGCCCTG10.7692307692307693No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGNGGCCAGCGCCCC10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACTGCATCATCCAT10.7692307692307693No Hit
CTTCTTGTTTTCGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACTCTTAACGGCCCCC10.7692307692307693No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAGGGGGCCCTG10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGCTCCGGTCGTTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.7692307692307693No Hit
GTTTCCAGGTCAAGGGTAACGGAGCTTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.7692307692307693No Hit
TAAACTAGTAGCCCTCCCGCACTAACCAGGTCCGGTAGGTAGTACCTGTGCACAACTTCTGCACATGCGCACAAG10.7692307692307693No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACGCAGCACCGCCTGGAAGGTCGCGAAGGGGCCCGG10.7692307692307693No Hit
GCACAGGTCGTATACGCATTGGCGGAAGTACTCAGAGGGACTCAGCACCGCCTGGCAGGTCGCGAAGGGGACATG10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCCCTTCTGCCCCTGCGCACATG10.7692307692307693No Hit
GTTTCCAGGTCAAGGGTAACGGAGCGTGGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.7692307692307693No Hit
AACTGTAGCTTACACTGACTCCGTGGAACAGTTTCTCCCCAATGAGACGAACGTCTGTGTTGTTATCAGCCAAGC10.7692307692307693No Hit
CTTTGACAGATCACGAGTTTCACCGGGATCACCAATGCCATACTCATTTTCAGCAAACACTCGGAAGAAGTAGGA10.7692307692307693No Hit
CTTCTTGTTTTCGGGACATGCTTCAGCCCCTAGCCCTCCTTGGTCACTGTCGCTCTGTCCACNCTTAACGGCCCC10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCNCCTGCGCACATG10.7692307692307693No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAAGCTGGAGGACCGAATTGACTACATAA10.7692307692307693No Hit
AAAGTCTCTGACGTGGCTGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGGTGCCATTCAGGTA10.7692307692307693No Hit
GTAGTGCTGCTCGTACAGGTAGCAGGCCACCACAATGCTGGCGGGGACCGTGTAGAGCAGCGNGAAGATGCCGAT10.7692307692307693No Hit
GTTTCCAGGTCAAGGGTAACGGAGCATGGACCAAGTCCCGCGTCTCCTCCAGGGTGCGGGGTGACCACTCAGTGA10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCATGCAGCCCTTGCCGCCTTCCCATAAGCAGCACTCTGCACAGCATCATCCAT10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGGTCTGGTCGGTAGTACCTGTGCACCAATTCTGCCCCTGCGCACATG10.7692307692307693No Hit
ACATCAGCCTCTTTATTCTCAGCATTGACAAAAGCCACCACAGCAATAGGCTGGAGGACCGAATTGACGACCTGA10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGCACAGCATCATCACT10.7692307692307693No Hit
TAAAATAGTAGACCTCCCGCACTCACCAGGTCCTGTCAATAGTACCTATGCACCACTTCTGCCCCTGCGCACATT10.7692307692307693No Hit
GTTTCCAGGTCAAGGGTACCGGAGCGTAGACCAAGTCCCGCGTCTCCTCCCGGGTGCGGGGGGCCCCCTCAGTGA10.7692307692307693No Hit
CCTTTAACCAGTATGCCTGTCCGCACCACACTGGTGGCCACTTCTGCAATCATCACCCTTTCAACAACTCCTGTT10.7692307692307693No Hit
GACACTTGGCCTGGAGTACGGTGATGGCGTTGAGGCTGTGGTAGGGCCGGGGCACCAGCAGCGGGTAGCCTGCAA10.7692307692307693No Hit
AAAGTCTCTGACGTGGATGAGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGTGTTGCCATTCAGGTA10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCACACTCACCAGGTCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCACATG10.7692307692307693No Hit
GTCCAGGGTGGGCATGGATTGCAGGGCCGCGGGCACGGGGGGCACTGCGTCCTGCTTGGGGATGGGTAGGGGGAT10.7692307692307693No Hit
TTTCAGGTCAGAGCTGAAGTCCTCACGACGTTTGCCCTCTGTGGATTTGCAAATTTCAGCTCCATTGGGATCATG10.7692307692307693No Hit
CAAGCAATCAAGGCCAGGCTACCCTGCAGCCCTTGCCACCTTCCCATAAGCAGCACTCTGAACAGCATCATCCAT10.7692307692307693No Hit
CAGTGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCNTGGCAGTATTAT10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCACCTTCCAATAAGCAGCACTCTGCACAGCATCATCCAT10.7692307692307693No Hit
TAAAATAGTAGCCCTCCCGCACTCACCAGATCCGGTCGGTAGTACCTGTGCACCACTTCTGCCCCTGCGCCCATG10.7692307692307693No Hit
TAAACTAGTAGCCCTCCCGCACTCACCAGGTCCGGTCGGTAGTACCTGTACACCACTTCTGCCCCTGCGCACATT10.7692307692307693No Hit
ACTTTAACAAGTATGCCTGTCAGCACCACACTGGTGGCCACTTCTACAATCAGCACCCTTTCAACAACTCCTGTT10.7692307692307693No Hit
CAATGACATGTATTCCCCCTCTTACCTTAAGGCTGTGATTCTTTCTCTCTTCTTTTTTCTTCCTGGCAGTATTAT10.7692307692307693No Hit
CTTTGCCCTCCTCCCTCTTTTCCCCTTTCTCACCAATGCCATACTCATTTTCAGCAAAAACTCGGAAGAAGTAGG10.7692307692307693No Hit
TCTCGTGCTCGCAGATGCCGCCCAGCGGCTCCGGGGCGGCAGGTGGGGCGGGAGGCTGCGCGGGGCCCGCGCCCC10.7692307692307693No Hit
CAAGCAATCAAGGCCAGTCTACCCTGCAGCCCTTGCCGCCTTCCCATAAGCAGCACGCTGCACAGCATCATCAAT10.7692307692307693No Hit

[OK]Adapter Content

Adapter graph